Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1210 |
Symbol | |
ID | 4116272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 1230989 |
End bp | 1232023 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638036000 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_643988 |
Protein GI | 108804051 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.224237 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAGCTCT CGGAGCTGGC CTTCCCCTTC GGCATCGTGG TGGGGGCGGT GCTCCTGGGG TTCGTCTTCG AGCTGGTCGT CCTGAGAAAG CTGCGGGAGC TCGCCGCCTC GACCACCTTC CGGGGCGACG ACCTGGTGAT CGGGGCGGTC AAGGGCGTGA CGACCCTGTG GTTCGGGATA GCCGGGGTCT ACCTGGCGCT CGTAAGGCTC CCGCTGGCCC CGGCGGTGGC CTCCCTGCTC AGGGATCTTT TGCTCGCGGC GCTCATCCTC TCCGGCGTCA TAGTGCTGGC CCGGATAGCC GCGAGGCTCG TCGGCTTCTA CGCCGGCCGG ATACAGGGGA TGCCCTCCTC CTCGCTGCTG ACCAACCTGG CCAGGATCAC CGTGCTGGTG CTCGGGGTGC TCGTGATCCT GCAGTCGCTC GGGATAGCGA TCGGGCCGCT CATCGCGGCC CTCGGGGTCG GGGGGCTGGC GGTGGCCCTG GCGATGCAGG AGACGCTCTC CAACCTCTTC AGCGGGGTGA TGATCATCGC CTCCCGCCAG CTGCGGCCCG GGGACTTCGT CCGGCTGGAC TCCGGCGAGG AGGGCTACGT GGAGGACGTG AACTGGCGCA ACACCACCAT CCGCTCGCTG CCGAACAACA TGATCATCGT CCCCAACGCG CGCCTCGCCC AGTCCATCGT GACGAACTAC TACCAGCCGG AGCGCAAGAT GTCGGTGGTG GTCCCGGTGG GGGTGAGCTA CGAGAGCGAC CTCTCCCACG TGGAGGAGGT GACCATCGGT GTGGCCAACG AGGTTATGAC CGAGATCGAG GGCGGCGTCC CGGAGTTCGA ACCTTTTATC CGGTACAACA ACTTCGGCTC CTACAGCATC GACTTCTCGG TGATCATGCA GACCCGGGAG GTGGTGGAGC AGTACCGGAT CAAGCACGAG TTCATAAAGC GCCTCCACCG CCGCTACGGG GAGGAGGGGA TAGAGATCCC CTACCCGGTC ATGACGAACA TCCACGTGGG GGAGGACGCC CCGGCCCGCC GCTGA
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Protein sequence | MELSELAFPF GIVVGAVLLG FVFELVVLRK LRELAASTTF RGDDLVIGAV KGVTTLWFGI AGVYLALVRL PLAPAVASLL RDLLLAALIL SGVIVLARIA ARLVGFYAGR IQGMPSSSLL TNLARITVLV LGVLVILQSL GIAIGPLIAA LGVGGLAVAL AMQETLSNLF SGVMIIASRQ LRPGDFVRLD SGEEGYVEDV NWRNTTIRSL PNNMIIVPNA RLAQSIVTNY YQPERKMSVV VPVGVSYESD LSHVEEVTIG VANEVMTEIE GGVPEFEPFI RYNNFGSYSI DFSVIMQTRE VVEQYRIKHE FIKRLHRRYG EEGIEIPYPV MTNIHVGEDA PARR
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