| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1127 |
|---|
| Symbol | |
|---|
| ID | 4116870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1158916 |
|---|
| End bp | 1160070 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638035917 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_643905 |
|---|
| Protein GI | 108803968 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2170] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02050] uncharacterized enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.118278 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTTATGG ATGCGGGGAA GAAGAGAGAG GCCGGCGCGC TCCTGCCGGA GGAGGCATTC
GAGACCGGGG CCCCGGAGGG CACCCTCGGC GCGGAGGAGG AGCTCTGGCT GGCCGACCCC
GAGACCCTCA AGCTCGCCGG GGGAGCGCAG AAGATCCTCG CCGCCGAGCC CGCGGAGCAC
TTCTCCGGGG AGCTCATAGA CTGCGAGGTG GAGGCGAACA CGGGGGTGCA CCGGGAGGCG
GCCGGTGTGG CGCGGGACCT CCTCGCCCGC CGCAGGACGC TCCTGGAGCA CGCCGGGCGG
CTGGGCCGGG TGCTCGGGAC CAGCGGCACC CACCCCCTGG GGGACTGGCG GGAGCAGGAG
ATCATAGACA AGCCCCACTA CCAGTACCTC AAGCGAAAGC TCGGCTGGCT CATCCGGCGC
AACAACACCT TCTCGCTGCA CGTCCACTAC GCCGTGCAGG GCAAGGAGAA GGTCATCTAC
CTGTTCGACC GGATCCGGGA GTACGTCCCC CACTTTCTGG CCGTCTCGGT GAACTCCCCG
TTCTGGCAGG GGGAGTTCAC CGACACCCGC TCGGCGCGCG CCCTCGTCTT CTCCCGCTCG
CTGCCCCACG CCGGGATGCC GGAGGCGTTC GGCTCCTGGT CGGCCTACGC GGGCTACCTG
GACTTCGTCG GCCGGCCCGG CGTCATCCGG CGGCTCGGCG AGATCTGGTG GGACATCCGG
CCCCACCCCA GGCTCTCCAC CCTCGAGATA CGGGCCTTCG ACGCCCAGAC GGACCCCGCG
CGCAGCGAGG CCCTGATCTC GCTGGCCGCC GCGACCTGCG ACATGCTCTG CGCGGAGTAC
GAGTCGGGCG AGCTGCGCCC GGCGCGCCCG GTGCGCGAGA TAGAGGACAA CAAGTGGAGC
GCCCAGCGCC ACGGCCTGGA CGGCCTCTTC GTGGACCACG AGACGCACGA GCCGGTGCCC
GCCCGCTGGG CGGTGGAGAG GCTCGCGGAG CTCGCGGCCT CCTCCTCGCG GCGGGACCTC
TCCTCGCTGG AGCGCCTGCT GGAGGAGCCC ACGGAGTCCG AGCGCCAGCT GTTGGTGTGG
CGAGAGACCG GCTCCGTCAA GGAGGTGGCG CGGGACATCG CGCGGCGCAC CCGCGCCGCC
ATCCCGGCTA CCTGA
|
|---|
| Protein sequence | MVMDAGKKRE AGALLPEEAF ETGAPEGTLG AEEELWLADP ETLKLAGGAQ KILAAEPAEH
FSGELIDCEV EANTGVHREA AGVARDLLAR RRTLLEHAGR LGRVLGTSGT HPLGDWREQE
IIDKPHYQYL KRKLGWLIRR NNTFSLHVHY AVQGKEKVIY LFDRIREYVP HFLAVSVNSP
FWQGEFTDTR SARALVFSRS LPHAGMPEAF GSWSAYAGYL DFVGRPGVIR RLGEIWWDIR
PHPRLSTLEI RAFDAQTDPA RSEALISLAA ATCDMLCAEY ESGELRPARP VREIEDNKWS
AQRHGLDGLF VDHETHEPVP ARWAVERLAE LAASSSRRDL SSLERLLEEP TESERQLLVW
RETGSVKEVA RDIARRTRAA IPAT
|
|---|
| |