| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1078 |
|---|
| Symbol | |
|---|
| ID | 4116666 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1111095 |
|---|
| End bp | 1111634 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 638035868 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_643856 |
|---|
| Protein GI | 108803919 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2839] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.128864 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGGGCGG CGGGCGATGC GGCGCTCTGG CTGGCCCTGG CCGCCGCGCT GCTGGGGCTC
GTGGGGAGCG TGGTCCCGGG CCTGCCGGGG GTCCCCCTGA TCTTCCTCTC CGCCCTCGTC
TACTCCTACC TGACGGGCTT CGAGGTGGTC GGCCCCGCCG CGCTGGCAGC CCTCGGGCTC
TTCGCCGCCC TGGCGCTCGC CGCCGACTTC GTGGCCACCG CCTACGGTGC CCGGCGCTTC
GGGGCGAGCC GCTGGGGGAC GGCGGGCGGG GCGCTGGGCG CCCTGCTCGG GACGCTGCTC
GGGGCGCTCT TTCTCGGGGT CGGCGCGATC CCCGGCCTCA TCCTGGGGGC GGTGGCCGGG
GTCCTCGCCG GCGAGCGCCT GCGCCGCAGG CGGCGGGGGG AGGCGCAGGA GAGCGGCGGG
TGGCGGCGAA CCTCCCGGGC GGCGGGCGGG GTGCTGGTCG GGTACGTGGC CGGGGCGGCG
GCGCAGGCGC TGCTCGCCCT CCTCAGCCTC GCCGTGTTCG TCGCCGCGCT CTTTGTCTAG
|
|---|
| Protein sequence | MGAAGDAALW LALAAALLGL VGSVVPGLPG VPLIFLSALV YSYLTGFEVV GPAALAALGL
FAALALAADF VATAYGARRF GASRWGTAGG ALGALLGTLL GALFLGVGAI PGLILGAVAG
VLAGERLRRR RRGEAQESGG WRRTSRAAGG VLVGYVAGAA AQALLALLSL AVFVAALFV
|
|---|
| |