Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1059 |
Symbol | |
ID | 4116939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1094098 |
End bp | 1094559 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 638035849 |
Product | transcriptional regulator, TrmB |
Protein accession | YP_643837 |
Protein GI | 108803900 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0495893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCTGG AGAAGACCGC GGAGGTTCGG GGGTCGCGCA GCACGGGGCA CCTGCTCGCC CGGGTGTGCC GCGAGTACCG GCAGCACGTG GGCGGGCTGC TCTCCCGCCT CGAGCTGCAC CCCGGGCAGG AGATGGTGCT GCTGGAGCTC TGGCGCGAGG ACGGGTTGCG CGGCGGGGAG CTCGCCCGCA GGCTGCGGGT CGAGCCCCCG ACCGTCACCC GCACGGTCCG GCGCCTGGAG GGCTGCGGGC TGGTGGAGCG CCGCCCGGAC CCCGAGGACG CCCGCTGCTT CCGGGTCTTT CTCACGCCGA GGGGCCGCTC GCTGCGCGGG CCCGTCGCCC GCTGCTGGGA GAGCGCCGAG GCCGACGCGC TCCGCGGGCT TCGCCCCGCA GAGCGGGCCG AGCTGCACCG GCTGCTGCTG CGGGTGCACG AGAACCTCGC CTCGCGCCGG GAGGTCGGGT GA
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Protein sequence | MRLEKTAEVR GSRSTGHLLA RVCREYRQHV GGLLSRLELH PGQEMVLLEL WREDGLRGGE LARRLRVEPP TVTRTVRRLE GCGLVERRPD PEDARCFRVF LTPRGRSLRG PVARCWESAE ADALRGLRPA ERAELHRLLL RVHENLASRR EVG
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