| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1058 |
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| Symbol | |
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| ID | 4116938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1092686 |
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| End bp | 1094101 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638035848 |
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| Product | major facilitator transporter |
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| Protein accession | YP_643836 |
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| Protein GI | 108803899 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.111803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACCCGC CCGCCCCCGC CGCGGAGCGC CAGCACCGGC TGCTGCTGGC CGTCGTCACC
GCGGCCGTGT TCGTCTCGGT GCTCAACAGC TCCATGGTGA ACGTGGTGGT GCCCGTGATC
GCCCGGGACT TCCGCGCCTC GGAGGCCCAG ATAGGATGGG TCATCACCGG CTTTCTCCTC
TCCTACGCCG TGGCGATACC CCTCTACGGC CGCGTCTCCG ACGCCTTCAG CCTGCGGAAG
GTGTTCGCGG TGGGCCTCTG GGTGTTCGCC GCGGGCAGCT TCGTGTGCGC GCTGGCCCCC
AGCCTCCCGG TGCTCGTCCT GGGCCGAATA CTGCAGGCCG CCGGCGGCGC GGCGGTCCCC
GCCCTGGGCA GCGTCGCGGT GACCCGGGTG CTCCCCCCCG GCGAGCGCGG CGGGGCCCTC
GGCCTGATCA TCTCCAGCGT CGGTGTGGGC GCCGCCGTCG GACCCATCGT GGGCGGGCTG
GTGGAGGAGC TCGCCGGGTG GCACCTGCTC TTCTACGGCT CGCTGCTGCT CTCCCTCCTG
CTCATCCCCG GCGCCCTGCG CGTCCTGCCC GACGGCGGGC AGAAGACCCC CCGGAGCTTC
GACCTTCCCG GAGGGATCCT GCTCGGCCTC TGCGCGGGCC TGTTCCTCTT CGGCATAACA
CAGGGGCAGA CGGCCTCCTT CCTCGCCCCC TCCTCCTGGG GCAGCTTCCT CCTCTCCGCG
CTCGCCGCCG GCCTGTTCGT CTGGCGGATA AACACCGCCC CCCACCCCTT CGTCTCCCCG
AAGCTCTTCG CCAACCGCCC CTACGTGGCC GCGGTCGCCG TGGGCTTCTT CTCCATGTTC
GCCAACGTCT CCACCCTCGT CACCGTCCCC CTGCTCGTGA CCGAGGCGAA CGGCCTCTCC
CCCGGCCAGG CCGGCCTGGT CCTCACCCCG GGGGCCGCCG CCCTCGCCGC CCTCTCCCCC
TTCACCGGCC GCCTCTCCGA CCGCATCGGC GTGAAGCTCC CCATCCGCGC GGGGCTCTCC
CTGATGCTGG CCTCCACCCT CTTCCTCTCC ACCCTCGGCG CCGGAGGCCC GGCCCCCCTC
GTCGCCGCCG GGATGCTCGG CGTGGGCACC GGCTTCGCCT TCGCCAACCC CCCCACCAAC
AACGCCGCCG CCAACGCCCT CCCCAGCAAG GAGGTGGGCG CCGGGCTCGG CATCTTCAAC
GGCGCCTTCT TCCTCGGCGG CGGTACCGGC CCCGCCGTCA TAGGAGCCCT CATCGCCGCC
CGCAGCGAAG GCCCCGCCCT CAACCCCCTC CACGACAACC CCGCCGCAGC CCCCTTCTCC
GACGCCTTCC TCGCCATCAG CGCCGCCCTC CTCCTCGCCC TCTGCGCCTC CCTCGCCCTG
AGCAACGGAA CGGGCGCCTC CTCGCGGGTT GATTAA
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| Protein sequence | MNPPAPAAER QHRLLLAVVT AAVFVSVLNS SMVNVVVPVI ARDFRASEAQ IGWVITGFLL
SYAVAIPLYG RVSDAFSLRK VFAVGLWVFA AGSFVCALAP SLPVLVLGRI LQAAGGAAVP
ALGSVAVTRV LPPGERGGAL GLIISSVGVG AAVGPIVGGL VEELAGWHLL FYGSLLLSLL
LIPGALRVLP DGGQKTPRSF DLPGGILLGL CAGLFLFGIT QGQTASFLAP SSWGSFLLSA
LAAGLFVWRI NTAPHPFVSP KLFANRPYVA AVAVGFFSMF ANVSTLVTVP LLVTEANGLS
PGQAGLVLTP GAAALAALSP FTGRLSDRIG VKLPIRAGLS LMLASTLFLS TLGAGGPAPL
VAAGMLGVGT GFAFANPPTN NAAANALPSK EVGAGLGIFN GAFFLGGGTG PAVIGALIAA
RSEGPALNPL HDNPAAAPFS DAFLAISAAL LLALCASLAL SNGTGASSRV D
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