Gene Rxyl_1013 details

Gene Information

• Locus tag: Rxyl_1013
• ID: 4116699
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: +
• Start bp: 1048013
• End bp: 1048663
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 638035803
• Product: CBS domain-containing protein
• Protein accession: YP_643791
• Protein GI: 108803854
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG3448] CBS-domain-containing membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0086429
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTGCTGG TAGAGGACTC CATGACCCGC GAGGTCGTCA CCGTCTCTCC GGAGACGCGG 
GCCGACGAGG CCCTTGCGCT GTGCAGGGAG CGGCGCATCC GGCACCTGCC CGTGCTGGAG 
GACGGGCGGC TGGTCGGCGT GGTCTCCGAC CGCGACCTCC GTTCGGCGAC CCCGGCCCTC 
GGCGACCCCG CGCGGGCCGC GGCGCTGCGG CGGCTGCGGG TGGGGGAGGT GATGAGCCGG 
GAGGTCGTGA CCGTCCGGCC GGACGAGCCG ATAGAGGTCG CGGCCAACAG GATGCGGGAG 
AAGGGCATCG GCTGCCTGCC CGTCGTGGAG GACGGGCGGC TCGCCGGGAT CATCACCACC 
TCCGACGTGA TGGAGACGCT GGTGTTTCTG GTCGGGGCCA ACGAGCCCGG GAGCCGCCTG 
GAGGTGCTCA TGCCCGACCG GCCGGGAAGC CTGGCGGGGG TGGCCGGCAT CTTCGGGGAG 
CTCGGGATAA ACATCGTGAG CGTGGCCACC GGGCCCCGCC AGAAGTTCCC CGACGGCGAC 
ACCCCGGGCC GGGTGGCGGT CTTCCGGGTG GACACCATAG ACCCCTCCCG CGCGATAGAG 
GTGCTGCGGC GCGCGGGATA CGTAGTGCTC TGGCCCCCGC AGGGTTCGTG A 

 

Protein sequence

MLLVEDSMTR EVVTVSPETR ADEALALCRE RRIRHLPVLE DGRLVGVVSD RDLRSATPAL 
GDPARAAALR RLRVGEVMSR EVVTVRPDEP IEVAANRMRE KGIGCLPVVE DGRLAGIITT 
SDVMETLVFL VGANEPGSRL EVLMPDRPGS LAGVAGIFGE LGINIVSVAT GPRQKFPDGD 
TPGRVAVFRV DTIDPSRAIE VLRRAGYVVL WPPQGS