Gene Rxyl_0871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0871 
Symbol 
ID4117201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp911857 
End bp912723 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content74% 
IMG OID638035654 
Producthypothetical protein 
Protein accessionYP_643650 
Protein GI108803713 
COG category[S] Function unknown 
COG ID[COG3342] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.616331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACTCG TCTCCACCTT CTCGATAGCG GGCTTCGACC CCGGGACGGC CTCCTGGGGG 
GTGGCCGTGC AGTCGAAGTT CCTGGCGGTG GGCGCGATCG TGCCGTGGGC CAGAGCGGGG
GCCGGGGCGG TGGCGACCCA GGCGATGGCG AACTACACCT ACGGCCCGCG CGGGCTCGAG
CTGCTCTCGG AGGGCCGGAC GGCGCAGGAG ACCGTGGAGG CCCTCACCGC CGGCGACCCG
CAGCGCGAGC ACCGGCAGGT GGGCGTCGTG GACGCCGAGG GTGGCTCGGC TACCTTCACC
GGGGGCGGTT GCCTCGACTG GGCCGGGGGC ATCGCCGGGG AGCACTACGC CGCCCAGGGG
AACATCCTCG TCGGGCGGGA GACGGTCGAG GCCATGGCCC GCGCCTTCGA GCGGGGGGAG
GATGACCTGG CCTCCCGGCT GCTCGCCGCC CTTCGGGCCG GTCAGGAGGC GGGCGGCGAC
CGGCGGGGGA GGCAGTCGGC GGCGCTGCTC GTCGTGCGGG AGGGAGGCGG CTACGGCGGC
GACAACGACC GGATGGTGGA CCTGCGCGTG GACGACCACC CCGACCCCAT AGCCGAGCTC
GCCCGCCTCT ACGGGCTGCA TAACCTGTAC TTCGGCGAGA CGAGGCCGGA GGACGTGGTC
GCCGTGGAGG GCGAGGTGAG GAGGGAGGTC GCCTCCTCGC TGCGCAGGCT CGGCTACCTG
CGGGAGGAGA GCCCCGACGA GCGTACGCTG CACGCGGCGC TCTCGGCCTT TGTCCGCACC
GAGAACTTCG AGGAGCGCGA GCAGCCTCCC GGCTACGCCG ACCGGGCCGT GCTGGAGTTC
CTCAAGGACC GGGCCGCCTC GCGGTAG
 
Protein sequence
MRLVSTFSIA GFDPGTASWG VAVQSKFLAV GAIVPWARAG AGAVATQAMA NYTYGPRGLE 
LLSEGRTAQE TVEALTAGDP QREHRQVGVV DAEGGSATFT GGGCLDWAGG IAGEHYAAQG
NILVGRETVE AMARAFERGE DDLASRLLAA LRAGQEAGGD RRGRQSAALL VVREGGGYGG
DNDRMVDLRV DDHPDPIAEL ARLYGLHNLY FGETRPEDVV AVEGEVRREV ASSLRRLGYL
REESPDERTL HAALSAFVRT ENFEEREQPP GYADRAVLEF LKDRAASR