Gene Rxyl_0795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0795 
Symbol 
ID4117008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp831365 
End bp832300 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content76% 
IMG OID638035579 
ProductRNase HII 
Protein accessionYP_643575 
Protein GI108803638 
COG category[L] Replication, recombination and repair 
COG ID[COG1039] Ribonuclease HIII 
TIGRFAM ID[TIGR00716] ribonuclease HIII 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.609688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCGGGC TTCCGGAGGA GCTCAGGCTG TACCTGGCGG AGCACGGCGT GGAGGTCGTC 
GGCTCCCGCC GGATAGACCA CGGCACCCAG TACCGGCTCG TGCGGGGCGG CGAGGAGGCC
ACCCTGAACG TCTACGACAC GGGGAGGGTG CTGGAGGGTG GGAGGGCCAC GGGGCTGCGG
GAGCTGCTGC GCGGCTGGCG GGAGAGCCGG CAGGGAGGGC CCGCGCGGCG GGTCCGCGGC
TCGGCCGCCC CGGGCCCCAA CCCGCTGCCC AGGATCGGGA TAGACGAGGC GGGCAAGGGC
GAGTACCTGG GGCCGCTGGT GGTGGCCGGG GTCCGGCTCT CGGGGGCCGG GGACGACCTG
CGGCTGCGGG AGCTCGGGGT GCGGGACTCA AAGGCCCTCG GGGCGGAGAG GGTGCGGCGG
CTCGCGCGGG CCGTCGTGGA GGAGCTGGGC GGGGAGGCGG TGCGCGTGAT CTCGCTCGCG
CCCCGCGAGT ACGGGCGGCG CCGGGAGGAG GCGGGGGGGA ACGTCAACCG CCTGCTGGCC
GAGCTCAACC TGGAGATCGT CCGCTCCCTC GCGCGCGAGG GCGTGCGGGC GGTGGTCGTG
GACTCCTTCG GCGAGCGGGC GCGCTCGTAC ATCGAGGGCG GCCTGCCGCC CGGGCTCCGG
CTCGAGGTCA GGCCGCGGGC GGAGGACGAC GTGGCGGTGG CCGCCGCCTC CGTGCTGGCC
CGGGCCAGGT ACCTGGAGGA GATGGAGGCG CTCTCCCGCC GGGTGGGGGT GGAGCTGCCC
CGGGGCAGCT CGGAGCGGGC GCTCGAGGTC GCCCGCCGCG TGTACGAGGA GCGGGGAGAG
GAGGGTCTCG CCGAGGTGGC CAAGCTCCAC TTCGCCACCA CGGAGCGCGT GCGCCAGCCC
GCCGGGGAGC AGAGAAGAGG AGGAATTACT TCATGA
 
Protein sequence
MSGLPEELRL YLAEHGVEVV GSRRIDHGTQ YRLVRGGEEA TLNVYDTGRV LEGGRATGLR 
ELLRGWRESR QGGPARRVRG SAAPGPNPLP RIGIDEAGKG EYLGPLVVAG VRLSGAGDDL
RLRELGVRDS KALGAERVRR LARAVVEELG GEAVRVISLA PREYGRRREE AGGNVNRLLA
ELNLEIVRSL AREGVRAVVV DSFGERARSY IEGGLPPGLR LEVRPRAEDD VAVAAASVLA
RARYLEEMEA LSRRVGVELP RGSSERALEV ARRVYEERGE EGLAEVAKLH FATTERVRQP
AGEQRRGGIT S