| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0682 |
|---|
| Symbol | |
|---|
| ID | 4117287 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 716785 |
|---|
| End bp | 718425 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 638035467 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_643464 |
|---|
| Protein GI | 108803527 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0755064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGGGGC TGGTGCTCGG CCCGGTGCTG CGCCACGCCG GGGGCGGCGA GGCGGTGGTC
TGGGTCGAGA CGGACGGGCC CTGCGAGGTG GAGGTGCTCG GGCACCGCTC CCGGACCTTC
CGGGTGGGAA GCCACCACTA CGGCCTGGTG CGCGTGGGCG GGCTCCGGCC GGGCGAGCCG
CGCCGGTACG GGGTGCGCCT GGACGGCAGG CCGCGCTGGC CCGAGCCCGG CTCCCCCTTC
CCCCCGAGCG CCATGAGCCT GCCGCCCGCG GAGGGACCCC TCCGGCTGGC CTTCGGCTCC
TGCCGGGTGG CCGCCCCCCA CGGGCCGCCC CACGCCCTCT CCCCGGAGGA GGACCCGCGG
GGGCTCGGCG TCGACGCCCT GCGCGCGCTG GCGCACCGCC TCTCCGGGGG CCCGGCCGAG
GAACTGCCGC ACCTCCTCCT GCTCCTGGGG GACCAGATCT ACGCCCACAA ACCCCCGGAG
GAGACCCTGG AATTTATCCG CTCCCGCAGG GACCCTCGCC GCCCGCCGGG GGAGGAGGTC
GCGGACTTCG AGGAGTACTG CCGCCTGTAC CGGGACTCCT GGGGAGATCC CGCCGTGCGC
TGGCTGCTCT CCACGGTCCC CTCCGCCATG ATCTTCGACG ACCACGAGAT CTCGGACGAC
TGGAACATCT CTGAGGCGTG GGTGGAGGAG GCCCGCCAGA GGCCCTGGTG GAACGCCCAG
ATAACCGGCG GGCTCGCCTC CTACTGGCTC TACCAGCACC TGGGCAACCT CCCGCCATCA
GAGCTGGAGA GGAGCGGCCT GCTGCGCGGG ATCAGGGCCT CCGGGGACGG CTGGCCCCTG
CTCGAGGAGT TCGCCCACGC CGCCCACCGA AAGACCTCGG GGACTCGCTG GAGCTTCCGC
CGGGACCTCG GCCGGGTGCG GCTCCTGGTG GTGGACTCCC GGGCGGGGAG GGTGCTCTCC
GAGGGCAGGC GCTCCATGCT CGACGAGGCG GGGTGGGCGT GGCTGGAGGG ACAGCTCTCC
GGCGGCTTCG ACCACCTGCT CTTCGCCACC TCCCTGCCGG TCCTCCTCTC ACCGGGCATG
CACGGCCTGC AGGCGGCGAG CGAGGCGCTG TGCGCCGGCG CCCGCGGGGC GCGGGCCGCG
CGGCGGGCCG AGAGGCTCCG CCGCGCGCAG GATCTCGACC ACTGGGCCTC CTTCCGGCGC
TCCTTCGAGC GGCTGCTCTC GCTGCTGCGC GAGGTCGGCC GCGGGCGCCG CGGGGAGCCC
CCCGCCTCCA TCCTGCTGCT CTCCGGCGAC GTGCACCACG GCTATGTGGC CCGCGCCGAC
CTCGGGCCGG GGGTGCGTAG CGCCGTCTAC CAGGTGGTCT GCTCGCCGCT CCGCAACGCC
CTGCCGCCGG AGAAGCGGCG CCTGCAGCGG CTCGGCTGGA CCGTGCCCGG CGCGCTCGCG
GGCTCTCTCC TCTCCCGCGC CGCGGGCGTC CCCGGCCCCT CCGCGCGTTG GCGCCTCGCC
CACCGCGAAC CCCGCTTCGA CAACCAGGTC GCGACGCTGG AGCTGGAGGG CCGCGCGGCG
ACGCTCACCC TGCAGCGGGC GCTGGCGGGC CCCTCGGGCG AGCCCTCCCT CCAGACGCTC
CGGCGAGAGC GCCTGGCATG A
|
|---|
| Protein sequence | MTGLVLGPVL RHAGGGEAVV WVETDGPCEV EVLGHRSRTF RVGSHHYGLV RVGGLRPGEP
RRYGVRLDGR PRWPEPGSPF PPSAMSLPPA EGPLRLAFGS CRVAAPHGPP HALSPEEDPR
GLGVDALRAL AHRLSGGPAE ELPHLLLLLG DQIYAHKPPE ETLEFIRSRR DPRRPPGEEV
ADFEEYCRLY RDSWGDPAVR WLLSTVPSAM IFDDHEISDD WNISEAWVEE ARQRPWWNAQ
ITGGLASYWL YQHLGNLPPS ELERSGLLRG IRASGDGWPL LEEFAHAAHR KTSGTRWSFR
RDLGRVRLLV VDSRAGRVLS EGRRSMLDEA GWAWLEGQLS GGFDHLLFAT SLPVLLSPGM
HGLQAASEAL CAGARGARAA RRAERLRRAQ DLDHWASFRR SFERLLSLLR EVGRGRRGEP
PASILLLSGD VHHGYVARAD LGPGVRSAVY QVVCSPLRNA LPPEKRRLQR LGWTVPGALA
GSLLSRAAGV PGPSARWRLA HREPRFDNQV ATLELEGRAA TLTLQRALAG PSGEPSLQTL
RRERLA
|
|---|
| |