| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0574 |
|---|
| Symbol | |
|---|
| ID | 4116753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 603080 |
|---|
| End bp | 603967 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 638035360 |
|---|
| Product | RpiR family transcriptional regulator |
|---|
| Protein accession | YP_643358 |
|---|
| Protein GI | 108803421 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1737] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000288568 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGAGA GAGAGGACGG TGAGCGGAGA GCCGGGGTAG CCGACGGGCG GGTGCGGGCC
CTGTTGCAGC GGCTCTTCGA CGGGAGCAGG CTCTCTCCCA CCCAGCGCCG GCTCGCCCGC
TACGTCATGG ACCATCCCGA CGAGGCGCTG TTTCTGTCGA GCGTGGAGCT GGCCCGGCGG
GTGGGGGTGA GCCAGCCTTC GGTGACGCGC CTGGCCGTGG CGATGGGGTA TGGGGGCTAC
GGGGAGCTGC AGAGGGAGCT GCGCGCGGTG GCCCTGGAGG GAGGGGGTGG GGGGGCCGGG
TCGGAGGCGC CGAACAAGTT CCAGGGGGCG GTGCGGGCCG AGATCGAGAA CCTGCGGGCG
CTGGAGCGCT CGTTGGAGGA CACCGGGGCC GTGGAGGAGC TGGGGAGGGA GCTTGCCGCC
TCGGAGCCCT TGTGCGTGCT GGGGCTGCGG GTCTCCGCGC CGCTCGCCGG GTACTTCGGT
TACTTCGCGA AGAAGATCCA CCCCGACGTC CGCGTCCTCA CAGAGGGCGG CAGCGCGGCC
TTCGACGCCC TGGCGCAGGC GCGGGCGGCG GGCGGGGCGT GGGTCTTGTG CTTTCTGCTG
CCGCGCCACC CGCGGGAGAC GCTCCAGGCC ATGAGCTACG CCCGGTCGCT GGGGCTGCGG
GTGGCCACGG TGGCGGACCG GGAGACGGGC TGGATAAGGG AGCTGAGCGA CGCGGTGCTG
CCCGCCGAGG TCGGCACCCG GCTCGTCTTC GACTCGCAGG CGGCGGCGAT GGTGCTCGCC
GGGGTGCTTC TGGAGGCGCT CTCGGACGCC GCGCCGAAGC GGGCGCAGGA GCGGCTGGAG
GAGTTCGAGC AGCGGGCGGC GCGTCTGGGG TTCTTCGAGA CGGGATGA
|
|---|
| Protein sequence | MAEREDGERR AGVADGRVRA LLQRLFDGSR LSPTQRRLAR YVMDHPDEAL FLSSVELARR
VGVSQPSVTR LAVAMGYGGY GELQRELRAV ALEGGGGGAG SEAPNKFQGA VRAEIENLRA
LERSLEDTGA VEELGRELAA SEPLCVLGLR VSAPLAGYFG YFAKKIHPDV RVLTEGGSAA
FDALAQARAA GGAWVLCFLL PRHPRETLQA MSYARSLGLR VATVADRETG WIRELSDAVL
PAEVGTRLVF DSQAAAMVLA GVLLEALSDA APKRAQERLE EFEQRAARLG FFETG
|
|---|
| |