| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0566 |
|---|
| Symbol | |
|---|
| ID | 4116747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 595213 |
|---|
| End bp | 596298 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638035354 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_643352 |
|---|
| Protein GI | 108803415 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTCAAGG TGCTTATGAT TTCGGGCAGT CTTCCTCCAC GCGTTTGTGG CGTTGGAGAC
AATGCGTTCA GGCTTGCTGC TGCCTTATCG GAGGCGGGAA TGAATGTCGA GATCCTGACA
ACGACTGGAC CGGTACCTGA TGACAGCCTC GGAGTCGACA TCCACGCATC CGTACGGAAC
TGGAATCTGC TTCGCCTTTC AGAAGCGATG AGGGAGATAC GAGCTATAAG ACCTGACATA
GTACATTTGC AGTACCCCAC AGCCGAGTAT AAGGCAGGGC TTCTACCTCA GGCGCTTGTC
CTCTCCAGAG TTCCCCTTGT AGTTACCATT CACGAGGCCA GCTACGTGCA TATACTGCGT
CGGATATCCC TCTATCCGTT TCTGATCCTT GCGGATCGCG TAGTCGCCAC GACGCGCTTT
GAAGCAGATT TTTTGGTCGG CCTGTACCCG TCGGTGCGCA AAAAGCTGTC GGTGGTCTCT
ATCGGCAGCA GCATACCGGC CGGGCCGGTA CTCGTTCGGG ATAGAAACAC GATAATGTAT
TTTGGGCTTA TCGCACCCAG AAAAGGGATT GAAGAATTTC TTGAACTGGC AGATTTAGCC
GGAGAGGCCG GGAAACCCTG GACGTTCCGG ATCGTTGGCG CCTTGTCTTC TAGATGGAGA
GAGTATGCTC AAGAGTTACA CAAGGATGCT CTTTCTCTTT CTGTGGAGTG GCATCTGAAC
CTGAGCGCGG AGGAAGTTGC GAAACACTTA GCAAGTGTTG GAGCCGTCTA CTTACCTTTC
CCGGACGGTG CTTCCTTGAG GCGGAGTTCC TTAATCGCTG CTTTAGTCAA TAGCTCGCCG
ATAATCACAA CCCGCGGTGG GTCAACCCCA TCCGACCTAG TAGACGGCGA GAATGTGCTT
TTTGCAAACT CGCCAGAGGT AGCGTTAAAG AAAATTCAGA GGCTTGTCTC AGATGCGGAA
CTCAGCCGTA GGTTGTCATG TGGAGCTGCC GAGTACGGCA AGAGATTCTC TTGGTCGCAG
ATAGCTGAGC AATACATCGA TTTGTACGGA TATGTTCTTT CTACAAGAAA GAGGGGCAGG
CCTTGA
|
|---|
| Protein sequence | MVKVLMISGS LPPRVCGVGD NAFRLAAALS EAGMNVEILT TTGPVPDDSL GVDIHASVRN
WNLLRLSEAM REIRAIRPDI VHLQYPTAEY KAGLLPQALV LSRVPLVVTI HEASYVHILR
RISLYPFLIL ADRVVATTRF EADFLVGLYP SVRKKLSVVS IGSSIPAGPV LVRDRNTIMY
FGLIAPRKGI EEFLELADLA GEAGKPWTFR IVGALSSRWR EYAQELHKDA LSLSVEWHLN
LSAEEVAKHL ASVGAVYLPF PDGASLRRSS LIAALVNSSP IITTRGGSTP SDLVDGENVL
FANSPEVALK KIQRLVSDAE LSRRLSCGAA EYGKRFSWSQ IAEQYIDLYG YVLSTRKRGR
P
|
|---|
| |