| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0443 |
|---|
| Symbol | |
|---|
| ID | 4116605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 474375 |
|---|
| End bp | 475544 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 638035231 |
|---|
| Product | peptidase S1 and S6, chymotrypsin/Hap |
|---|
| Protein accession | YP_643229 |
|---|
| Protein GI | 108803292 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGGTTA GAATTGCCCG GATGACGGCG CTCGACTGGT GCATAGTTGC GTTCGTGGCG
CTGGCCGTCT TTCGCGGCGC CCGGACCGGC TTTCTCGCGG GCCTCTTCTC GCTGGTGGGG
GTGCTGCTGG GGGCCTCGGT CGGCTCCCGG GTGGCCGGGC ACCTCATCCC GGAGGGCGAG
AGCCCCTTTC TGGGGGCCGC GATCACGCTG GTGAGCATAG TCTCCTTCGC GATCCTCGGC
GAGATGATCG CCCGCTCGGC CGGGGGCTCG CTCCGCAGCA GGCTCCGGGG CGGCGGCTCC
TCCCTGCTCG ACAGCGCCGG CGGGGCCGCC CTCGGGCTGG CGCTCTCCCT GCTGCTGGTG
TGGGCGGTCG GGATCTTCGC CATCCAGTCC CCCCCGCTCT CCGGGCTGCA CCCGCTGGTG
AAGGACTCGC GCATCATCCG CGCGCTCGAC GAGCGGATGC CCGCCGAGCT CCTCACCCAG
GCCGTCGCCC AGCTCAACCC GCTCCCCCAG ATGCGCGGCC CCGACGCCGG GGTGGGGGCG
CCCGACGGGA GCATCGTCCG CGACCCCGAC GTGCTCGCCG CAAGCTCCCG GATGGTCCGG
ATCACGGGCA TCGCCTGCGG CTACGGCATC GAGGGCTCCG GGTGGGTCGC CGCTCCGGAC
CTGATCGTCA CCAACGCCCA CGTGGTCGCC GGGGAGACCG TCACCAGCGT CCAGCCCGGG
GGGACCGGGC CGCGCCGGAG GGCCGACGTG GTGGTCTTCG ACCCCAAGAA CGACGTGGCC
GTCCTGCGGG TGGAGGACCT GGGGCTCACC CCCCTGCCGC TGGACGAGCC GGTCCCCGGA
GAGCCCGCGG CGGTCCTCGG CTTCCCCGGC AACGGGCCGC TGGACATCCA GCCCGCCCGC
ACCGGGGCCA CGCAGCGCGT GATCTCCAGC GACGCCTACA ACCGCGGCCC GGTGGAGCGC
ACGGTCACCA GCTTCCGGGT CTACGTCCGG CCGGGGAACT CCGGGGGGCC GGTGGTGAAC
GCCGAGGGCG AGGTGACCGC CACCATCTTC GCCAGCCGGG CCAACTCCCG CAACTCCGGC
TACGGGATCC CCTCCCAGAT CATCCGCCGC CACCTGGAGA GGGCCACCCT CCGCGCGGAG
CCGGTGGGCA CGGGTCCCTG CGCGAGCTGA
|
|---|
| Protein sequence | MWVRIARMTA LDWCIVAFVA LAVFRGARTG FLAGLFSLVG VLLGASVGSR VAGHLIPEGE
SPFLGAAITL VSIVSFAILG EMIARSAGGS LRSRLRGGGS SLLDSAGGAA LGLALSLLLV
WAVGIFAIQS PPLSGLHPLV KDSRIIRALD ERMPAELLTQ AVAQLNPLPQ MRGPDAGVGA
PDGSIVRDPD VLAASSRMVR ITGIACGYGI EGSGWVAAPD LIVTNAHVVA GETVTSVQPG
GTGPRRRADV VVFDPKNDVA VLRVEDLGLT PLPLDEPVPG EPAAVLGFPG NGPLDIQPAR
TGATQRVISS DAYNRGPVER TVTSFRVYVR PGNSGGPVVN AEGEVTATIF ASRANSRNSG
YGIPSQIIRR HLERATLRAE PVGTGPCAS
|
|---|
| |