Gene Rxyl_0440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0440 
Symbol 
ID4116602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp471349 
End bp471972 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content68% 
IMG OID638035228 
ProductTetR family transcriptional regulator 
Protein accessionYP_643226 
Protein GI108803289 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGAGAGG AGCGGGACAG GCGGGACCAG ATCCTGGAGG CGGCCTTCGA GGAGTTCTCG 
GCGAAGGGGT TTCGGGGGGC GACGATAAAG AGCATCGCGG AGGCGGCGGG GCTGCAGTCT 
CCGGCCCTGA TCTACTGGTA CTTCCCGGAC AAGGAGGCGC TCTTCAGGGA GGTCTTGGGG 
TCGCGCATCC CGGTGCTGCG CGCGGTGCGG GACCCGGCGC GGCTGCTGGA GCGTCCGCCC 
GAGGAGGTGC TGCCGCTCAT AGCGAGGAGG TACCTCTCCA CCTTCGACAA CCCGGCGGCC 
CAGAGGATGG CGCGGTTGCT GGTCGGCGAG GCCACGCGGC GGCCCGAGAT CGCGGAGATC 
TTCGGCAACG CCGTCATAAA GAGGATGCTC GGGTTCCTCA AGAGCTACAT GGCCCGCCAG 
GTCGAGCTCG GCAGGCTCCG CCCGCACGAC GTCCGCTCCA GCGCGCGGGC CTTTATCGGG 
ATGCTGCTGC CCCAGGTCGG GGGCAAGGTC TTCTTCCCCG CGATAAGGGA GGACGGCCTC 
ACCGACGAAG AGCACGTGGA GAACGCGGTC GGGATGCTGC TGGAAGGGCT GAGGCCGGAA 
GGGAAGCAGG GATGGACGCC GTAG
 
Protein sequence
MGEERDRRDQ ILEAAFEEFS AKGFRGATIK SIAEAAGLQS PALIYWYFPD KEALFREVLG 
SRIPVLRAVR DPARLLERPP EEVLPLIARR YLSTFDNPAA QRMARLLVGE ATRRPEIAEI 
FGNAVIKRML GFLKSYMARQ VELGRLRPHD VRSSARAFIG MLLPQVGGKV FFPAIREDGL 
TDEEHVENAV GMLLEGLRPE GKQGWTP