| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0401 |
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| Symbol | |
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| ID | 4115222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 430304 |
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| End bp | 431368 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638035190 |
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| Product | xylose isomerase-like TIM barrel |
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| Protein accession | YP_643188 |
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| Protein GI | 108803251 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4952] Predicted sugar isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0010085 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGAACT CCGTGGGGAT CTGGGCGTTT GGGCCGGCGG TGACCCGCTT CGTCCCCCCC
GGCTACCACC CCGAGGCCGC AGAGGAGCCG ATGGCCGAGA AGACAAAGCG GGTGTGCGAG
GGCCTCTCCG ATGTCCTCGA CGGCATCGAG TACCACTACC CCGGCGAGAT AAACGAGGAG
AACGCAGACG AGATCACGGA GATCCTCGAG AGCCACCGCA TGGATCTGCC CGTGGTGGCC
GCGGGGCTGC ACACCGACCC CACCTACGCC CTGGGCGCGT TCATAAACCC CGACCCCTCG
CTGCGCCGCA AGGGGATAGA CACCCTCAAA CGCGGGATAG ACCTGGCCGC GGAGGTGGGG
GCGAACTTCA TCATCTGGCC CGGCGCCGAA GGATACAACT ACCCCTTCCA GCGGCCCTAC
GCCGAGACCT GGCGGGCGTT TGTCGAGGCC GTCGCCGAGC TTGCCGAGCA CGCGAGCGGC
CGGGGCATAA AGGTCTTCCT CGAGCACAAA AACAGCGAGC CGGCGATGCA GATCCTGATG
AAGAACATCG GGATGACGCT CTTTGTGATC CACAAGGTGG AGGAGCTCGG GGTGGACACC
CGGAACCTTC TCGTCAACAT GGACTGGCAG CACCTGATCA TGAACGGCGA GAACCTCGCC
GAGTACGCGG CGCTGCTCTC TGCCGAGAAC AGGCTCGGCC ACCAGCACGC CAACGACGGC
TGGGGCACCT TCGACGACGA CAACGTGGTC GGCACCAACT TCTTCATGCA GACCCTCGAG
CTCTGCCACA CCCTGCGGGA GATCGGCTAC GGAGAGGGCG GGGAGCGGAT GGGCTTCGAC
CTCTATCCCT ACACGGAGGA CCAGGTGGCC GCGGTGCGGC GCGCCATCCT GCACCTGGAG
TTCATCTGGG AGCTCGCCGG GAGGATAGAC GGCGCGGTGC TCGCCGAGGC CAGAGAGAGG
GCCGACGCGC TCGGGGCCCA GAAGGCCGTC TACGGCGCCC TGGGCCTCGA CGAGGAGTTC
GAGCGGCGGG TGGTGCGCGC CCGCAGAGAG GAGCGCGGGG GATGA
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| Protein sequence | MKNSVGIWAF GPAVTRFVPP GYHPEAAEEP MAEKTKRVCE GLSDVLDGIE YHYPGEINEE
NADEITEILE SHRMDLPVVA AGLHTDPTYA LGAFINPDPS LRRKGIDTLK RGIDLAAEVG
ANFIIWPGAE GYNYPFQRPY AETWRAFVEA VAELAEHASG RGIKVFLEHK NSEPAMQILM
KNIGMTLFVI HKVEELGVDT RNLLVNMDWQ HLIMNGENLA EYAALLSAEN RLGHQHANDG
WGTFDDDNVV GTNFFMQTLE LCHTLREIGY GEGGERMGFD LYPYTEDQVA AVRRAILHLE
FIWELAGRID GAVLAEARER ADALGAQKAV YGALGLDEEF ERRVVRARRE ERGG
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