Gene Rxyl_0399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0399 
Symbol 
ID4115220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp427722 
End bp428930 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content73% 
IMG OID638035188 
ProductROK domain-containing protein 
Protein accessionYP_643186 
Protein GI108803249 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000118651 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGTCTG GCGAGAGCGG GACGGTGGGT CAGATCTTCG GGTTGATCCG CAGCGGGCGG 
GCCCGGACGC GGGCCGAGCT GGCCGCGGTG ACGGGGCTGA CGCGGGCGAC GGTCTCGCAG
AGGGTGGAGG TGCTGATGGA GGCCGGGCTG GTCGTGGAGA CCAAGGAGGG GGTTTCGACC
GGCGGACGGC CGCCGATGGT GCTCGGGTTC AACAAGGACG CGGGCGTGGT GTTGGCGGCG
GACCTGGGGG CCACCCACTG CCGGCTTGCG GTGGCGGACC TCGGGGGCAG GCCGCTGGTG
GAGCTGCCGG CGGATCTGGA CATCGCCCAG GGCCCGGACG CGGTGCTCGG GTGGGTGCAG
GACAGGTTTG AGGAGCTCCT GGAGGAGGCG GGCAGGAGCA GGGAGGAGGT CTGGGGCATC
GGGGTGGGGG TGCCCGGGCC GGTGGACTTC GCCCGCGGGC AGGCCGTGAG CCCCCCGATC
ATGCCCGGCT GGGACCGGGT CCCCATCCCC GAGCGGTTCA GGGAGCGGTT CGGCGGGGTG
CCCGTGCTGG TGGACAACGA CGTCAACATC ATGGCGCTCG GGGAGCACCG GGTGAACTGG
TCGGACGTGG AGCACCTGCT CTTCGTGAAG GTGGCCACCG GCATCGGGTG CGGCATCGTG
GCGGGGGGCA GGATCCACCG CGGGGAGCGG GGCGCCGCCG GGGACATCGG GCACATCCGG
ATCAGCGGCC ACGAGGAGAC CGTCTGCCGG TGCGGCAACG TGGCCTGCGT GGAGGCGGTG
GCCGGCGGGT GGGCGCTGGC CAAGCAGCTC AGCGGGCTGG GGTACCCGGC GACCGGCAGC
AGGGACGTGG TGGGGCTCGT GCGGGCCGGC AACCCGGCCG CGGCCCGGCT CGTGCGGACG
GCCGGGGAGC TCATCGGGGA GGTGCTGGCG AGCCTGGTCA ACTTCTTCAA CCCGGCGGTG
ATCATCATCG GCGGGGACCT GGCGCACGCC CACGAGCAGC TGTTTGCCGG GATACGCTCG
GTCGTCTACC AGCGGTCGCT GCCGCTGGCG ACGCGGCACC TGCAGATCGT CCCCTCCGAG
CTCGACGACC GGGCCGGGAT ACACGGGGCG GCGGCGATGG TGATCGAGCA CGTACTGCGC
CCCGAGACGA TCGAGGAGAT GGCGCAGGAG AGGATCCGGC GGAGGGCCGG GAGGCCGGCC
GGCGGGTAG
 
Protein sequence
MRSGESGTVG QIFGLIRSGR ARTRAELAAV TGLTRATVSQ RVEVLMEAGL VVETKEGVST 
GGRPPMVLGF NKDAGVVLAA DLGATHCRLA VADLGGRPLV ELPADLDIAQ GPDAVLGWVQ
DRFEELLEEA GRSREEVWGI GVGVPGPVDF ARGQAVSPPI MPGWDRVPIP ERFRERFGGV
PVLVDNDVNI MALGEHRVNW SDVEHLLFVK VATGIGCGIV AGGRIHRGER GAAGDIGHIR
ISGHEETVCR CGNVACVEAV AGGWALAKQL SGLGYPATGS RDVVGLVRAG NPAAARLVRT
AGELIGEVLA SLVNFFNPAV IIIGGDLAHA HEQLFAGIRS VVYQRSLPLA TRHLQIVPSE
LDDRAGIHGA AAMVIEHVLR PETIEEMAQE RIRRRAGRPA GG