| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0325 |
|---|
| Symbol | |
|---|
| ID | 4116057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 349038 |
|---|
| End bp | 349970 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 638035114 |
|---|
| Product | dihydrodipicolinate synthetase |
|---|
| Protein accession | YP_643113 |
|---|
| Protein GI | 108803176 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.210252 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAAG CCCGGGATGA GGCCCCGCGC GGCGTCTTCG CCGCCGCGCT CACCCCCATG
GACGGCAACC TGAACGTGGA CCGCGAGGCC TTCGCCCTCC ACTGCCGGCG GCTGCTGGAG
GCCGGGTGTC ACGGCCTCGG GGTCTTCGGG ACCACGGGGG AGGCGAGCTC GCTCTCGGCG
AAGGAGCGGG CCGCTGCGCT GGAGGCGCTC GTGGAGGCCG GCATCCCGGG GGAGCGGCTG
CTCCCCGGCA CGGGCTCCTG CGCCCTCACG GAGGCCGTCT GGCTGAGCCG GGCCGCCCTG
GAGGCGGGGG CGGCCGGGGT GCTGGTCCTC CCCCCCTTCT ACTACAAGGG CGTGACCGAC
GAGGGCCTCT ACCGCTTCTT CGCGCAGCTC ATAGAGCGCG TCGGCGACGG GCGGCTGCGG
CTCTACCTCT ACCACTTCCC CCAGATGACG GGGGGCGTGG GGATCAGCGT GCCCCTCGTC
AGGCGGCTGG CCGCGGACTA CCCGGAGGTG GTCCGCGGCA TCAAGGACAG CGAGGGGAGC
TGGCCCCGCA TAGAGGCGCT GTGCCGGGAG CTGCCCGGCT TCGGGGTCTT CGCCGGGACC
GAGCGCTTTC TGCTGGACAC GCTGCGCGCC GGCGGGGCGG GCTGCATCTC GGCCACCGCC
AACGTGACCG CCCGGCTGGC CCGCCGGGTC TACGACCTGC ACGCGGCCGG CGAACCCGGG
GAGGCCTCCT CCGCCCAGAG GCGCCTGACC GGGCTGCGGA AGGCCCTGGA GGCCTACCCG
GCCATCCCGG CGCTGAAGCT CCTGATGCGA GACCTGACCG GAGAGGACCG CTGGCTGAAC
CTCCGCCCCC CGCTGGTGAA CCTGGAGGGC GAGAGCGCCG CCCGCCTCCT GGAGGAGGCC
CGCACCCTGG GGCTCGCGGA GCACGCCCCC TGA
|
|---|
| Protein sequence | MSEARDEAPR GVFAAALTPM DGNLNVDREA FALHCRRLLE AGCHGLGVFG TTGEASSLSA
KERAAALEAL VEAGIPGERL LPGTGSCALT EAVWLSRAAL EAGAAGVLVL PPFYYKGVTD
EGLYRFFAQL IERVGDGRLR LYLYHFPQMT GGVGISVPLV RRLAADYPEV VRGIKDSEGS
WPRIEALCRE LPGFGVFAGT ERFLLDTLRA GGAGCISATA NVTARLARRV YDLHAAGEPG
EASSAQRRLT GLRKALEAYP AIPALKLLMR DLTGEDRWLN LRPPLVNLEG ESAARLLEEA
RTLGLAEHAP
|
|---|
| |