Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0324 |
Symbol | |
ID | 4116056 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 348184 |
End bp | 348999 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 638035113 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_643112 |
Protein GI | 108803175 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.173693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGGCAG GGAACACAAA GACGGCGCTC GTCACCGGCT CGACGGACGG GCTGGGCCGC GGGGTGGCCC GGGAGCTCGC CCGCCGGGGG TACGCCGTCA TCCTGCACGG CCGCAGCGAG GCCCGCTGCG AGGAGGCGGC GGCGGAGCTC CCGGGGGGCG CGGCCGGCTA CCTGGTGGCG GACCTCTCCT CCCTCGGGGA GGTCCGAAAG ATGGCCCGGG AGGTTCTCGC GGGGCGCGAG CGCCTCGACC TGCTCGTGAA CAACGCGGGG GTCATCTCCC GCGAGCGCCG GGAGAGCCGG GAGGGCTTCG AGCTGACCTT CGCCGTGAAC TACCTCTCCC ACTTCCTGCT CACGCTCCTG CTCCTCCCGC TGCTGCGCCG CTCGGCGCCC GCCCGGGTGG TGAACGTCGC CTCGGCCGCC CAGAGCCCCA TAGACTTCGA GGACCCCATG ATGGAGCGCT CCTACAGCCC CATGGAGGCC TACGCCCGCA GCAAGCTGGC CCAGGTGATG TTCTCCTTCG CGCTGGCCGG GCGGCTCTCC GGGACGGGCG TCTGCGTCAA CGCCCTCCAC CCGGCCTCGC TGATGGACAC CAAGATGGTG CGCGAGAGCT TCGGCCGCCC CATGAGCTCC GTGGAGGAGG GGGTGCGGGC CGTCGTGCGC CTCGCCGCCT CTTCCGAGCT GGAGGGGGTC TCCGGCCGCT ACTTCGAGGG CACCCGCGAG GCCCGGGCCC ACCCGCAGGC CTACGACCCT GCGGCCCGGG AGCGCCTGTG GGAGCTGAGC GAGGGGCTCT GCGGCGCCCT GGATGCGGGC CGCTGA
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Protein sequence | MEAGNTKTAL VTGSTDGLGR GVARELARRG YAVILHGRSE ARCEEAAAEL PGGAAGYLVA DLSSLGEVRK MAREVLAGRE RLDLLVNNAG VISRERRESR EGFELTFAVN YLSHFLLTLL LLPLLRRSAP ARVVNVASAA QSPIDFEDPM MERSYSPMEA YARSKLAQVM FSFALAGRLS GTGVCVNALH PASLMDTKMV RESFGRPMSS VEEGVRAVVR LAASSELEGV SGRYFEGTRE ARAHPQAYDP AARERLWELS EGLCGALDAG R
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