Gene Rxyl_0324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0324 
Symbol 
ID4116056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp348184 
End bp348999 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content74% 
IMG OID638035113 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_643112 
Protein GI108803175 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.173693 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGCAG GGAACACAAA GACGGCGCTC GTCACCGGCT CGACGGACGG GCTGGGCCGC 
GGGGTGGCCC GGGAGCTCGC CCGCCGGGGG TACGCCGTCA TCCTGCACGG CCGCAGCGAG
GCCCGCTGCG AGGAGGCGGC GGCGGAGCTC CCGGGGGGCG CGGCCGGCTA CCTGGTGGCG
GACCTCTCCT CCCTCGGGGA GGTCCGAAAG ATGGCCCGGG AGGTTCTCGC GGGGCGCGAG
CGCCTCGACC TGCTCGTGAA CAACGCGGGG GTCATCTCCC GCGAGCGCCG GGAGAGCCGG
GAGGGCTTCG AGCTGACCTT CGCCGTGAAC TACCTCTCCC ACTTCCTGCT CACGCTCCTG
CTCCTCCCGC TGCTGCGCCG CTCGGCGCCC GCCCGGGTGG TGAACGTCGC CTCGGCCGCC
CAGAGCCCCA TAGACTTCGA GGACCCCATG ATGGAGCGCT CCTACAGCCC CATGGAGGCC
TACGCCCGCA GCAAGCTGGC CCAGGTGATG TTCTCCTTCG CGCTGGCCGG GCGGCTCTCC
GGGACGGGCG TCTGCGTCAA CGCCCTCCAC CCGGCCTCGC TGATGGACAC CAAGATGGTG
CGCGAGAGCT TCGGCCGCCC CATGAGCTCC GTGGAGGAGG GGGTGCGGGC CGTCGTGCGC
CTCGCCGCCT CTTCCGAGCT GGAGGGGGTC TCCGGCCGCT ACTTCGAGGG CACCCGCGAG
GCCCGGGCCC ACCCGCAGGC CTACGACCCT GCGGCCCGGG AGCGCCTGTG GGAGCTGAGC
GAGGGGCTCT GCGGCGCCCT GGATGCGGGC CGCTGA
 
Protein sequence
MEAGNTKTAL VTGSTDGLGR GVARELARRG YAVILHGRSE ARCEEAAAEL PGGAAGYLVA 
DLSSLGEVRK MAREVLAGRE RLDLLVNNAG VISRERRESR EGFELTFAVN YLSHFLLTLL
LLPLLRRSAP ARVVNVASAA QSPIDFEDPM MERSYSPMEA YARSKLAQVM FSFALAGRLS
GTGVCVNALH PASLMDTKMV RESFGRPMSS VEEGVRAVVR LAASSELEGV SGRYFEGTRE
ARAHPQAYDP AARERLWELS EGLCGALDAG R