Gene Rxyl_0248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0248 
Symbol 
ID4116079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp254588 
End bp255352 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content73% 
IMG OID638035038 
Producthypothetical protein 
Protein accessionYP_643037 
Protein GI108803100 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACCCGA CGCACCTCCT CATCCTGGGC GCGGCCGGCC TGTTCGGCGG CATCCTCTCC 
GGGCTGTTCG GGGTGGGGGG AGGGGGCGTG TTCGTCCCGG CGCTGGTGTA CGGGGCGGGG
TGGAACATAA AGGAGGCGGT GGCGGCGAGC CTGGTGATCA TCGTCTTCAG CGCCCTCTCC
GGCACGGTGC GGAGCATGCG GAGCGAGTCG CCGGTCAACT GGCGGGTGGC GGCCCTCTTC
TCCTGCACGG TGGCGCCGTC GGCGCTCATC GGGGTGTTCG TGAGCCGCTT CTCGCCGGAC
GACGTGGTCG AGCTGGTCTT CGGCTGCTTT CTCCTCTCGC TCGCCTACCC CACCTTCCGG
CGCGGCTCCG GGCGGGGCGG GCGGCGCTCG CTGCCCCCGG CGCTCGCGCT GCTCGGTGGG
GTGGGGGTCG GGACGCTCTC CGGGCTCATC GGGATCGGGG GCGCGGCGAT GATGGTGCCG
CTGATGATGC TGGGCTTCGG GGTCTCGCCG AAGAGCGCCA TCTCCACCAG CCTCGCCATC
ACGGTGCTCC TCGGCTCGGT CGGCGCCGCC GGCTACATCC TCACGGGCTT CGACAGGCTC
GGGGGCCTGC CGCCCCTCAT CGCGTGCGCG ATGGCCGGGG CGTGGCTCGG GGTCCGGCTG
CGGGACCGGC TCTCCGAGGG GTTCCTGCAG AGGGCCTTCG CGGCCTTCAT GGTGGTGGTC
GCGGTGCGGG TGCTCTACGA CGCCCTGAGC GGGCTGCTCG CGTAG
 
Protein sequence
MDPTHLLILG AAGLFGGILS GLFGVGGGGV FVPALVYGAG WNIKEAVAAS LVIIVFSALS 
GTVRSMRSES PVNWRVAALF SCTVAPSALI GVFVSRFSPD DVVELVFGCF LLSLAYPTFR
RGSGRGGRRS LPPALALLGG VGVGTLSGLI GIGGAAMMVP LMMLGFGVSP KSAISTSLAI
TVLLGSVGAA GYILTGFDRL GGLPPLIACA MAGAWLGVRL RDRLSEGFLQ RAFAAFMVVV
AVRVLYDALS GLLA