Gene Rxyl_0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0140 
Symbol 
ID4117710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp145174 
End bp145704 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content72% 
IMG OID638034932 
ProductTetR family transcriptional regulator 
Protein accessionYP_642931 
Protein GI108802994 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCGCGGC GGTTATCTGC CTCCCGGCGG GCGCAGATCC TGGAGGCGGC CCTCGGTATG 
TTCTCGGAGC GGGGCTACGA GGGGACGCCG CTCAGCGCCA TCGCCGAGGA GGTGGGGCTG
AGCAAGCCGG GGATCGTGCA CCACTTCCCG CACAAGGACG ACATCCTGGA GGCCCTCTTC
GGGCCCGTCT TTGGCGAGGT GGAGGCGCTG CTGGAGGGGA GGCCTGGTAG GGAGGAGCTG
CTCGAGGGGT ACCTGGAGAT CATACTCCGC AACCGCCGGC TGACGGTGCT GCTGGCGACC
GATCTGGCGA TCCTGAACCG GCCCCGGATC GGGGAGCGGG TCTGCGCTCT GAACCTGCGG
CTGCGGGTGG CGCTCGCCGG GCCCGGCTCG ACGCTGGAGG AGGAGATGCG GGCCGAGTGC
GCCCTGGGGG CTCTGAGGTC GCCGGTGGTC TTCTTTCCGG AGGCGGACCC CGGGCTGGTC
AGGAGGGTGG CGCTGGAGGC CGCGCGGCGG GTGCTCGGGG CCGGCCGCTA G
 
Protein sequence
MARRLSASRR AQILEAALGM FSERGYEGTP LSAIAEEVGL SKPGIVHHFP HKDDILEALF 
GPVFGEVEAL LEGRPGREEL LEGYLEIILR NRRLTVLLAT DLAILNRPRI GERVCALNLR
LRVALAGPGS TLEEEMRAEC ALGALRSPVV FFPEADPGLV RRVALEAARR VLGAGR