Gene Rxyl_0097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_0097 
Symbol 
ID4117668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp101142 
End bp102035 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content69% 
IMG OID638034890 
Productdihydrodipicolinate synthase 
Protein accessionYP_642889 
Protein GI108802952 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID[TIGR00674] dihydrodipicolinate synthase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAGCG GCACGCTCAC GGCCCTCATA ACCCCGTTCC GGAACGGGGA GGTGGACGTA 
GAGGCCCTGG AGGGGCTGGT CGAGTTCCAG ATCCAGCAGG GCGTCTCCGG GCTCGTGCCC
TGCGGGACCA CCGGCGAGAC CCCCTGCCTC TCCGAGGAGG AGGACCGGCT GGTGGTGGAG
ACGGTGGTCC GGGTGGCGGG CGGCCGGGTC CCGGTGATCG CCGGCACCGG CTCGAACAGC
ACCGACATGG CCATCCGGTA CACGCGGATG GCCGAGGAGG CCGGGGCCGA CGGCTCGCTG
CAGGTCGCCC CCTACTACAA CAAGCCGACC CAGGAGGGCC TCTACAGGCA CTTCGCCACC
ATAGCCGAGA ACACCTCGCT GCCCATAATC CTCTACAACA TCCCCTCGCG CACGGGGGTG
ACGATCTCGG CGGAGACCAC CGCGCGCCTG GCGGAGATCC CGAACATCGT GGGCACCAAG
GAGGCCACCC ACTCCATGGA CCTGGCCTCG GATTTGCGCC GGCTGTGCGG GGAGGAGTTC
TGCATCCTCT CCGGAGATGA CTCGCTGACG CTGCCCATCA TGGCCCTGGG GGGGCGCGGC
GTGATCTCGG TGGCCTCCAA CGTGGCCCCG GCCGCGGTCT CGCAGCTCAC GCAGGCCCTG
CTGGAGGGCG ACTACGAGCG GGGCCGCGAG CTGCACTACG AGCTCCTGCC GCTGTTCAGG
GCGCTGTTTA TCGAGACGAA CCCCATCCCG GTCAAGACGG CGGCCTCGCT GCTGGGCCTG
TGCTCGGACG AGATGCGGCT CCCGATGCAG CCGATGCGGG GCGAGAACCT CCGCAGGCTG
CAGGAGGTGA TGGAGGAGAA GGGCCACCTG CTCCCGACCC CCGAGGAAGT GTGA
 
Protein sequence
MFSGTLTALI TPFRNGEVDV EALEGLVEFQ IQQGVSGLVP CGTTGETPCL SEEEDRLVVE 
TVVRVAGGRV PVIAGTGSNS TDMAIRYTRM AEEAGADGSL QVAPYYNKPT QEGLYRHFAT
IAENTSLPII LYNIPSRTGV TISAETTARL AEIPNIVGTK EATHSMDLAS DLRRLCGEEF
CILSGDDSLT LPIMALGGRG VISVASNVAP AAVSQLTQAL LEGDYERGRE LHYELLPLFR
ALFIETNPIP VKTAASLLGL CSDEMRLPMQ PMRGENLRRL QEVMEEKGHL LPTPEEV