Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_0097 |
Symbol | |
ID | 4117668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 101142 |
End bp | 102035 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638034890 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_642889 |
Protein GI | 108802952 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAGCG GCACGCTCAC GGCCCTCATA ACCCCGTTCC GGAACGGGGA GGTGGACGTA GAGGCCCTGG AGGGGCTGGT CGAGTTCCAG ATCCAGCAGG GCGTCTCCGG GCTCGTGCCC TGCGGGACCA CCGGCGAGAC CCCCTGCCTC TCCGAGGAGG AGGACCGGCT GGTGGTGGAG ACGGTGGTCC GGGTGGCGGG CGGCCGGGTC CCGGTGATCG CCGGCACCGG CTCGAACAGC ACCGACATGG CCATCCGGTA CACGCGGATG GCCGAGGAGG CCGGGGCCGA CGGCTCGCTG CAGGTCGCCC CCTACTACAA CAAGCCGACC CAGGAGGGCC TCTACAGGCA CTTCGCCACC ATAGCCGAGA ACACCTCGCT GCCCATAATC CTCTACAACA TCCCCTCGCG CACGGGGGTG ACGATCTCGG CGGAGACCAC CGCGCGCCTG GCGGAGATCC CGAACATCGT GGGCACCAAG GAGGCCACCC ACTCCATGGA CCTGGCCTCG GATTTGCGCC GGCTGTGCGG GGAGGAGTTC TGCATCCTCT CCGGAGATGA CTCGCTGACG CTGCCCATCA TGGCCCTGGG GGGGCGCGGC GTGATCTCGG TGGCCTCCAA CGTGGCCCCG GCCGCGGTCT CGCAGCTCAC GCAGGCCCTG CTGGAGGGCG ACTACGAGCG GGGCCGCGAG CTGCACTACG AGCTCCTGCC GCTGTTCAGG GCGCTGTTTA TCGAGACGAA CCCCATCCCG GTCAAGACGG CGGCCTCGCT GCTGGGCCTG TGCTCGGACG AGATGCGGCT CCCGATGCAG CCGATGCGGG GCGAGAACCT CCGCAGGCTG CAGGAGGTGA TGGAGGAGAA GGGCCACCTG CTCCCGACCC CCGAGGAAGT GTGA
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Protein sequence | MFSGTLTALI TPFRNGEVDV EALEGLVEFQ IQQGVSGLVP CGTTGETPCL SEEEDRLVVE TVVRVAGGRV PVIAGTGSNS TDMAIRYTRM AEEAGADGSL QVAPYYNKPT QEGLYRHFAT IAENTSLPII LYNIPSRTGV TISAETTARL AEIPNIVGTK EATHSMDLAS DLRRLCGEEF CILSGDDSLT LPIMALGGRG VISVASNVAP AAVSQLTQAL LEGDYERGRE LHYELLPLFR ALFIETNPIP VKTAASLLGL CSDEMRLPMQ PMRGENLRRL QEVMEEKGHL LPTPEEV
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