| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_0049 |
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| Symbol | |
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| ID | 4117738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 49520 |
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| End bp | 51400 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638034843 |
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| Product | transketolase |
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| Protein accession | YP_642842 |
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| Protein GI | 108802905 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCATG TAAACCAGAA GACCGTAGAC GCGACCACCC TGCGCGAGCT CGCGCAGCAG
CTGAGGGTGG ACTCGATCCG CGCGAGCACC ACCGCCGGGT CCGGCCACCC CACCTCCTCC
ATGTCCGCGG CGGACCTCAT GGCCGTCCTC ATGGCGCGCT ACCTCCGCTA CGACTTCGAC
GACCCGGAGA ACCCCCTCAA CGACCGGCTC GTCTTCTCCA AGGGCCACGC CTCGCCGCTG
CTCTACTCCA TGTACAAGGC GGCCGGGGCC ATAACGGACG AGGAGCTGCT CTCCTTCCGC
AAGTTCGGCA GCCCCCTCCA GGGCCACCCG ACCCCCGCCC TCCGGTGGGT GGACGTGGCC
ACCGGCTCGC TCGGGCAGGG GCTGCCCATA GGGGTCGGGC TCGCGCTCGC CGGCAAGCAC
CTCGACCGGC TGCCCTACCG CGTGTGGGTG CTCTGCGGGG ACTCCGAGAT GGCCGAGGGC
TCGATGTGGG AGGCCTTCCA GCACGCCGCC CACTACGGTT TGGACAACCT CGTCGCCGTC
CTGGACATGA ACCGGCTCGG CCAGACCCGT GAGACCATGG ACGGCTGGAA CGGCGACGCC
TACGCCGGAC GGGCCCGGGC CTTCGGCTGG CACGCCATCC AGATCGACGG CCACGACGTG
GAGGAGATCG ACCGGGCCTA CGCCGAGGCG CTGGAGCAGG ACAAGCCGGT GCTCGTGATC
GCCCGGACCA GAAAGGGGCG CGGGGTCTCC TTCCTCGAGG ACCAGCTCGG CAAGCACGGC
AAGCCCGTGC CGCCGGAGCA GGCCGAGCAG GCCATAGAGG AGCTCGGCGG CGAGCGCAGC
ATAACCGTCG AGGTCCCGCG GCCCGACCGC AGGCCGCAGC CCCCCGTAAG GGACGGGTTC
ACCGGGGAGT ACAGGCCCAA GCGGTGGGAG GTCGGCGACT CCGAGGCCAC CCGCACCGCC
TACGGCGAGG GGCTCAAGGC GCTCGGCGCC GCCCGCGAGG ACGTGGTGGT CATGGACGGC
GAGGTCAGCG ACTCCACCCG GGCCCAGAAG TTCGCCGAGG CCTACCCCGA TAGGTACTTC
GAGATGTTCA TCGCCGAGCA GCAGATGGTC GCCACCGCCG TCGGGATGAG CGTGCGCGGG
TACGTGCCCT TCGCCTCCAG CTTCGCCGCC TTCCTCACCC GGGCCCACGA CTTCATCCGG
ATGGCCGCCA TCTCCGGGGC GAACCTGCGG CTGTGCGGCT CGCACGCCGG GGTCTCCATC
GGTCCGGACG GCCCCTCGCA GATGGGGCTC GAGGACCTGG CGATGATGCG CTCGCTGCAC
GGCTCCACCG TCCTGTACCC CTGCGACGCC AACCAGACGG TCAAGCTGGT GCGGGAGATG
GCCGGGCTCG AGGGGATAAG CTTCCTGCGG ACCACCCGCG ACTCGACCCC CGTGATCTAC
CCCGCCGACG AGGAGTTCCC GGTGGGCGGC AGCAAGGTGG TCCGCTCCTC GGAGGAGGAC
GCGGTCACCG TGGTCGCCGC GGGCATCACC GTCCACCAGG CGCTGCGGGC CGCCGAGGAG
CTGCAGGGGG AGGGCATCAG GGTGCGCGTC ATCGACGCCT ACTCGGTAAA GCCCATCGAC
GCCCGGACCC TCATCTCCTC GGCCCGACAG ACCGCGGGCC GGGTGGTGGT CGCCGAGGAC
CACTGGCCGG AGGGGGGGCT CGGCGAGGCG GTGCTCTCCG CCTTCGCCGA GAACGGGGCC
CTCGACGGCC TCCGGCTCCG GCACCTGGCG GTGAGCGGCA TGCCGGGCTC CGGCAAGCCG
CAGGAGCTCT TGGACGCGGC GGGGATCGGC TTCGGCGACA TAGCCGGGGC GGTGCGCTCC
CTGCTGGACG GCCGGGCATA A
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| Protein sequence | MAHVNQKTVD ATTLRELAQQ LRVDSIRAST TAGSGHPTSS MSAADLMAVL MARYLRYDFD
DPENPLNDRL VFSKGHASPL LYSMYKAAGA ITDEELLSFR KFGSPLQGHP TPALRWVDVA
TGSLGQGLPI GVGLALAGKH LDRLPYRVWV LCGDSEMAEG SMWEAFQHAA HYGLDNLVAV
LDMNRLGQTR ETMDGWNGDA YAGRARAFGW HAIQIDGHDV EEIDRAYAEA LEQDKPVLVI
ARTRKGRGVS FLEDQLGKHG KPVPPEQAEQ AIEELGGERS ITVEVPRPDR RPQPPVRDGF
TGEYRPKRWE VGDSEATRTA YGEGLKALGA AREDVVVMDG EVSDSTRAQK FAEAYPDRYF
EMFIAEQQMV ATAVGMSVRG YVPFASSFAA FLTRAHDFIR MAAISGANLR LCGSHAGVSI
GPDGPSQMGL EDLAMMRSLH GSTVLYPCDA NQTVKLVREM AGLEGISFLR TTRDSTPVIY
PADEEFPVGG SKVVRSSEED AVTVVAAGIT VHQALRAAEE LQGEGIRVRV IDAYSVKPID
ARTLISSARQ TAGRVVVAED HWPEGGLGEA VLSAFAENGA LDGLRLRHLA VSGMPGSGKP
QELLDAAGIG FGDIAGAVRS LLDGRA
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