| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_5386 |
|---|
| Symbol | |
|---|
| ID | 4114212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 5674521 |
|---|
| End bp | 5675873 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638034541 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_642542 |
|---|
| Protein GI | 108802345 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3408] Glycogen debranching enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.474069 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGGAC TGATGCCACA CGACCCCAGC TTCGCGCCCA CGCAACTCGC GGCCCGCGCC
GCGTACCTCC TGCGCGGTAA CGACCTGGGC GCGATGACCA CCGCGGCGCC CCTGCTGTAC
CCGCACATGT GGAGCTGGGA TGCCGCGTTC GTGGCGATCG GGCTGGCGCC GTTGAGCGTC
GAGCGTGCGG TCGTCGAACT CGACACGTTG CTCTCCGCAC AGTGGCGCAA CGGGATGATC
CCGCACATCG TGTTCGCCAA CGGGGTCGAC GGATACTTCC CGGGCCCCGC CCGCTGGGCG
ACGTCCGCCC TGGCGGCCGA CTCCCCGCGC ACCCGCCACA CCTCCGGGAT CACCCAGCCG
CCCGTGCACG CGATCGCCGT ACAGCGCATC CTCGACCACG CCCGCACCAG GGGCCGGTCG
ACCCGCCAGG TGGCCGAGGC CTTCCTCGAC CGGCGCTGGG GGGATCTGGT GCGCTGGCAC
CGCTGGCTGG CCGAATGCCG CGACCAGAAC GGCCGCGGCC GCATCACGCT CTATCACGGG
TGGGAGTCCG GCATGGACAA CTCCCCGCGG TGGGATGCCG CCTACGCCAA CGTGATTCCG
GGTGCGGTGC CGGAATATCA GCGCGAGGAC AACAAGATCA ACACCGACGC CACCCAGCGG
CCGTCCGATC ACGAGTACGA CCGCTACCTG TGGTTGCTCG AGGAGATGAA ATCCGCCCGC
TACGACGATC ATCTGCTGCC GAAGGTGATG AGTTTCGCCG TCGAGGACGT GTTCGTCTCG
GCGATCTTCT CGGTGGCCTG TCAGGTGCTC GCCGAGATCG GGGAGGACTA CAAACGCCCC
AACGCCGACG TGCGTGACCT GTACGCGTGG GCCGAGCGGT TCCGCGCCGG CGTCATCGAG
ACCACCGACC AACGCACCGG CGCGGCAAGG GATTTCGACG TCCGCACGGA GAAGTGGGTG
GCCACCGAGA CCGTCGCGCA GTTCGCCCCG CTGTTGTGCG GCGGCCTGCC GCACCACCGG
GAGCGGGCGC TGCTGCGCCT GCTGGAGGGG CCGCGGTTCT GCGGGCATCC CGACCTCAGA
TACGCGTGCA TCCCCTCGAC GTCGCCGGTG TCACGCGACT TCCGGCCGCG GGAGTACTGG
CGCGGCCCGG TCTGGCCGGT GATGACGTGG CTGTTCGCCT GGTGCTTCGC CCGGCGCGGG
TGGGCCGAAC GGGCCAGGGT GCTACGGCAC GAGGGACTGC GCCAGGCCAG CGACGGCACC
TTCGCCGAGT ACTACGAACC GTTCACCGGC GAACCGTTGG GCAGCATGCA GCAGTCGTGG
ACCGCCGCGG CGGTACTGGA CTGGCTGGGC TAG
|
|---|
| Protein sequence | MIGLMPHDPS FAPTQLAARA AYLLRGNDLG AMTTAAPLLY PHMWSWDAAF VAIGLAPLSV
ERAVVELDTL LSAQWRNGMI PHIVFANGVD GYFPGPARWA TSALAADSPR TRHTSGITQP
PVHAIAVQRI LDHARTRGRS TRQVAEAFLD RRWGDLVRWH RWLAECRDQN GRGRITLYHG
WESGMDNSPR WDAAYANVIP GAVPEYQRED NKINTDATQR PSDHEYDRYL WLLEEMKSAR
YDDHLLPKVM SFAVEDVFVS AIFSVACQVL AEIGEDYKRP NADVRDLYAW AERFRAGVIE
TTDQRTGAAR DFDVRTEKWV ATETVAQFAP LLCGGLPHHR ERALLRLLEG PRFCGHPDLR
YACIPSTSPV SRDFRPREYW RGPVWPVMTW LFAWCFARRG WAERARVLRH EGLRQASDGT
FAEYYEPFTG EPLGSMQQSW TAAAVLDWLG
|
|---|
| |