Gene Mmcs_5338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5338 
Symbol 
ID4114165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand- 
Start bp5622646 
End bp5623287 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content68% 
IMG OID638034494 
ProductTetR family transcriptional regulator 
Protein accessionYP_642495 
Protein GI108802298 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.220511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCGAA GTGTCGTCAA TGAGTATCAT GCGGGTATGG CACGTCCCCG TAAATTCGAT 
GAAGCGGAGG TCGTCGAGGC CAGTCGGGAT CTGTTCTGGG ATCAGGGATA CGCCGCGACG 
AGCATCGACG ACCTGAGTGC CGCCACCGGA TTGGGTCGCG GCAGTTTCTA CAAGGCGTTC 
GGCGACAAGC ACAGCATGTT CCTGCGCAGC CTCGAGTTGT ACTGCACCGA AGCCCTCGAC 
GGCATCCGCG CCGAACTCCG CAACCCGGAC CTGTCGGCCT ACGACCGTCT GGTCGGCCAC 
GTGCGGGGCA CCGCCGCGGG CGTGGCGTCC GACACCGATC GCCGCGGCTG CCTGCTGGCC 
AAGAGTGCGG CGGAACTGTC CGCCACCGAC CCGGCGGTGG CCAAGCTGGT CAAACGCACG 
TTGGACGGGT GGCTGCGGGA ACTGACGGCC ACCGTCAGCG CCGCCCAAGC CGACGGAGAC 
GTCCCGGCCG ACACCGACGC CAAAGCGATG GCCAGCCTGC TACTGGTCGT GCTGCGCGGG 
ATGGAGGCAC TGCGCAAGGG TGGGGCGTCC GCGACGACGG TCAAGATGGC CGCCGAACAG 
GCCATCGCGA TGCTCGCGGT GCCGGCACCC GTCGCCGGCT AG
 
Protein sequence
MYRSVVNEYH AGMARPRKFD EAEVVEASRD LFWDQGYAAT SIDDLSAATG LGRGSFYKAF 
GDKHSMFLRS LELYCTEALD GIRAELRNPD LSAYDRLVGH VRGTAAGVAS DTDRRGCLLA 
KSAAELSATD PAVAKLVKRT LDGWLRELTA TVSAAQADGD VPADTDAKAM ASLLLVVLRG 
MEALRKGGAS ATTVKMAAEQ AIAMLAVPAP VAG