Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_4949 |
Symbol | |
ID | 4113778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 5240493 |
End bp | 5241407 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638034103 |
Product | haloalkane dehalogenase |
Protein accession | YP_642109 |
Protein GI | 108801912 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00300745 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACGC TGCGCACCCC GGACGAACGG TTTCTGGCTC TGCCCGACTT CCCTTATCCG CCAGGTTATT CCGACATCGA CGACGGTGAC GGTGGCCGGC TGCGGGTGGC CTGGGTGCAG GATGGGCCTG CCGACGGCGA ACCGGTGTTG ATGCTGCACG GCGAGCCGTC GTGGTCGTTC CTGTACCGCA AGATGATCCC GATCCTGGCG GGCGCGGGGT TCCGCGTCGT CTGCCCCGAC CTCGTCGGGT TCGGCCGTTC CGACAAGCCC ACGCGCGTCG AGGACCACAC CTACGCCCGC CACGTCGAGT GGATGCGCAC GCTCGCGTTC GATGTGCTCG ACCTGCGCGG GGTGACGCTG GTGGGGCAGG ACTGGGGTGG GCTGATCGGG CTGCGGTTGG CCGCCGAACA CCCCGACCGG TTCGCCCGCA TCGTCGTCGC GAACACCGGG CTGCCGACCG GGGATTTCCC GATGCCCGAC ATCTGGTGGC AATTCCGCAA CGCGATCCAG ACTGTGGACG ATCTCGACGT GGGGCGATGG GTTCAGGCCG GATGTGCTCA TCCGATGTCC GACGAGGTGC GCGCCGCCTA CGACGCCCCG TTCCCCGACG ACTCCTACTG CGCAGGCCCC CGCGCGATGC CGCTGCTTGT GCCCACCACG CCCGAGGACC CGGCGTCGGC GGCGAACCGC GCGGCGTGGG CGGCGCTGTC CGCCAGCGAC ACCCCGATGC TCGTCGCGTT CAGCGACAGC GATCCGATCA CCGGCGCGAT GGCGCCGATC TTCGCCCGCG AGATGCGCGG CGCCGCGGGC ATCGACCACC CGACGATCCG CGAAGCGGGA CACTTCCTGC AGGAGGACGC GGGCGAGGAC CTCGCCCGGG CGGTCGTCGA GTTCTGCCGC AGGCGGTCCT GTTGA
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Protein sequence | MQTLRTPDER FLALPDFPYP PGYSDIDDGD GGRLRVAWVQ DGPADGEPVL MLHGEPSWSF LYRKMIPILA GAGFRVVCPD LVGFGRSDKP TRVEDHTYAR HVEWMRTLAF DVLDLRGVTL VGQDWGGLIG LRLAAEHPDR FARIVVANTG LPTGDFPMPD IWWQFRNAIQ TVDDLDVGRW VQAGCAHPMS DEVRAAYDAP FPDDSYCAGP RAMPLLVPTT PEDPASAANR AAWAALSASD TPMLVAFSDS DPITGAMAPI FAREMRGAAG IDHPTIREAG HFLQEDAGED LARAVVEFCR RRSC
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