Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_4923 |
Symbol | |
ID | 4113752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | - |
Start bp | 5212165 |
End bp | 5214978 |
Gene Length | 2814 bp |
Protein Length | 937 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638034077 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_642083 |
Protein GI | 108801886 |
COG category | [R] General function prediction only |
COG ID | [COG3899] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.360996 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAGCC AAGAGCGGGG ACGACTGCTG TACGGCCGCG CCGTCGAGAC CGCCGCACTG CGGCGGGTGA TCGCGGCGGT GCGGACGGGC CGGTCGCAGG TGCTGGTGCT GCGCGGTGAG CCGGGTGCCG GTAAGACCGC CCTGCTCGGC TACCTGCTCG ACGAGGCGCC GGGTTGGCGC TGTGTGCACG TGGCGGGCGT CGAATCCGAT ATGGAACTGG CCTATGCCGG TCTGCACCAG TTGTGCGGGC CCCTGATGGA TTACCTCGAC GACCTGCCGC CCCCGCAGCG CGATGCGCTC ACCGTCGCGT TCGGGCGCGG TGTCGGCCCA CCTCCGGAGC GCTTTCTCGT CGGGTTGGCG GTGCTGAGCC TGGTCGCCGC CGCCGTGCAC GAGCAACCCC TGTTGTGCGT CGTCGACGAC GCGCAGTGGC TGGATCAGGT GTCCGTGCAG ACTCTGGGGT TCGTAGCCCG CCGGTTGATG GCAGAACCGG TGGCGCTGGT GTTCGCGGCG CGTAACGAGG GTGCGGATGC ACTGACGGGA CTGCCCGAGT TGCCCGTTCG TGGGCTCTCC GACGCCGATG CGCGGGAATT GTTGGAACGC GCAATGATCG GCGGCATCGA TCCCAGTGTG AGGGACCGGG TGGTGGCCGA AACTCGTGGC AACCCACTGG CATTGCTCGA AGTGCCGCGC AGCTACTCCT CGGCCGAACT GGCCGGTGGC TTCTGGACTG TGGGTGCGAT GACATCGCGG ACCCGGATCG AGGAGAGCTT CGTCCAGCGC ATCCAGGTGC TGCCGGACCG GACCCGCCTG CTGCTGTTGC TCGCGGCCGC CGAACCGGTC GGCGACTCGT CGCTGTTCCT CCGTGCCGCC GCCATGCTGG GCATCGCCGT GGACGCGTTG GCGCCGGCCG AGAGCGCGGG CGTCATCGAA TTCGGCCCCC GTATGCGCTT TCACCACCCG TTGATGCGCG CGGCGGCCTA CCGCGCCGCC GACCTCGCCG ACCGCCGCGC GGTCCACGCG GCACTGGCCG CGGCCACCGA CGCCGAATCC GACCCCGACC GCCGGGCCTG GCACGCCGCC AACGCGGTGG CGGGCACCGA CGACGCGGTC GCCGCCGAAC TCGAGGCCTC GGCGAGCCGG GCCCAGAGTA GGGGCGGCAT CGCAGCAGCA GCCGCGTTCA TGGAGCGGGC CGCCGTGCTC ACCGCCGATC CCGAGCTCCG CGGCAACCGA GCTCTGGCCG CCGCACAGGC GAAAAGGGAC TCCGCGGCGA CGGCGAAGGC GTACGAACTG TTGACCATCG CCGAAACGGC TCCGCTGTCA GCACTCCAAC GTGCCCGCGC CGCGCGTCTG CGTGCCCAGA TGGCGTTCGT GCGCAGCCGG GTGGGGGAGA GTGGTGCCCC GGCCGTCGGG GACACCGCGC CGGCGTTACT GGATGCGGCG AAACAGTTCG AGGGCCTCGA TGACTTCGCC TCCCGCGAAA GCTATCTCGA GGCTTTCGCC GCGTTGATGT ATGCCGGCCG TCTCGCCCAG CCGGGCGCTC TCCTCCATAC CGCCGAAGCG GCGCGATCGG CGACAGTGCG GATCTCGGAG CTGCCGCGGG CCGTGGACCT GTTCTTCCGG GGGATCACCG ATTGGATCAT CGGGGGGATC CGCGGCGGCG AGTACCTGCG CGGCGCGCTG GACACGATGC GCGCGTTGGC GTCCGACGAC CCCGGCCAAC TGCTGCGGTG GCTGGTGCCG GCCTTTCCGA TCCTGCAGGA AGCGGCCGCC CACGAACTGT GGGATGAAGA CCTCGTCGAC GCACTGTCTG CCGCCGTCGC CGGACAGGCA CGTGAAGTCG GCGCCTTGGC CGGCCTCCCG CAGGCGCTGG TGTACCGGGC CGGCGTCCAC GTGCTGTTCG GCGAGTTCAA CACGGCAGCG ACGTTGATCG CCGAGGCGAA CTCCATCACG GCGGCGACGA CGCACAACGG GCCCGTCCGG TATCACTCCC TCTTGGTCGC CGCGTGGCGG GGCGAGCCGG CGGAGGCCAT GCGGCAGATC GATGCGGCCG CCGCTGACGG CGCAGCGCGC GGTGAGGGCC GTGCGATCGG GCTGACCGGG TATGCGACCG CGGTGTTGTA CAACGGGCTC GGCCGCTACG AGGAGGCGTT CACCGCTGCC CGCCGGGCCT GTGAGTTCGA GGATCGGGGT TTCTACAGCT GGTGCCTGCA CGAACTGGTG GAGGCCGCCG CACACCTCGG CGAAACCGAT GCCGCACGGC GAGCGGTCAG CCTCATCGAA GAGCGCGCCG GCGCCAGCGG CACCCCGTGG GGGCTCGGTG CGTTGGCCAG TGCGCAGGCC ATGTTGGCCG ACAACGACGA GGCCGACCGG TTGTTCACCG AAGCGCTCGA CCACCTGGGT CGGTCTCGCG TGGCCGTGCA CCGGGCCCGC ACGCACCTCG GCTACGGCGA GTGGCTCAGG CGGATGAACC GGCGCGGTGA TGCCCGCCGT CAGCTCAACG AGGCCCATGA GCTGTTCGTC CGGATGGGCG CACAGGCCTA CGCCGAGCGG GCACGCAAGG AGCTCATCGC CGTCGGTGAG AAGGTTCGCA AACAGCGGTT GACCTCGGGC GACGAACTGA CCGCGCAGGA GGCGCAGATC GCGCGGCTCG CGGCCGACGG GCTGACCAAT CAGGAGATCG GTGCCCAGCT GTTCATCAGC GTGCACACCG TCGAATGGCA TCTGCGCAAG GTCTTCGTGA AGGTGGGGAT CACGTCGCGC AGGCAACTGC GCACCGTTGC GTGGTCTCAC CAGGGGGTCA CTACGGACCA TTGA
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Protein sequence | MASQERGRLL YGRAVETAAL RRVIAAVRTG RSQVLVLRGE PGAGKTALLG YLLDEAPGWR CVHVAGVESD MELAYAGLHQ LCGPLMDYLD DLPPPQRDAL TVAFGRGVGP PPERFLVGLA VLSLVAAAVH EQPLLCVVDD AQWLDQVSVQ TLGFVARRLM AEPVALVFAA RNEGADALTG LPELPVRGLS DADARELLER AMIGGIDPSV RDRVVAETRG NPLALLEVPR SYSSAELAGG FWTVGAMTSR TRIEESFVQR IQVLPDRTRL LLLLAAAEPV GDSSLFLRAA AMLGIAVDAL APAESAGVIE FGPRMRFHHP LMRAAAYRAA DLADRRAVHA ALAAATDAES DPDRRAWHAA NAVAGTDDAV AAELEASASR AQSRGGIAAA AAFMERAAVL TADPELRGNR ALAAAQAKRD SAATAKAYEL LTIAETAPLS ALQRARAARL RAQMAFVRSR VGESGAPAVG DTAPALLDAA KQFEGLDDFA SRESYLEAFA ALMYAGRLAQ PGALLHTAEA ARSATVRISE LPRAVDLFFR GITDWIIGGI RGGEYLRGAL DTMRALASDD PGQLLRWLVP AFPILQEAAA HELWDEDLVD ALSAAVAGQA REVGALAGLP QALVYRAGVH VLFGEFNTAA TLIAEANSIT AATTHNGPVR YHSLLVAAWR GEPAEAMRQI DAAAADGAAR GEGRAIGLTG YATAVLYNGL GRYEEAFTAA RRACEFEDRG FYSWCLHELV EAAAHLGETD AARRAVSLIE ERAGASGTPW GLGALASAQA MLADNDEADR LFTEALDHLG RSRVAVHRAR THLGYGEWLR RMNRRGDARR QLNEAHELFV RMGAQAYAER ARKELIAVGE KVRKQRLTSG DELTAQEAQI ARLAADGLTN QEIGAQLFIS VHTVEWHLRK VFVKVGITSR RQLRTVAWSH QGVTTDH
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