Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_4122 |
Symbol | fumC |
ID | 4112952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 4387387 |
End bp | 4388808 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638033265 |
Product | fumarate hydratase |
Protein accession | YP_641283 |
Protein GI | 108801086 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.264623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCCG ACAGCGCTGT CGACCAGAAC ACCGAGTACC GCATCGAACA CGACACCATG GGCGAGGTCC GGGTGCCCAA GGATGCGCTG TGGCGGGCGC AGACCCAGCG CGCCGTCGAG AACTTCCCGA TCTCGGGCCG CGGCCTCGAG CGCACCCAGA TCCGCGCGCT GGGACTGCTC AAAGGCGCCT GCGCGCAGGT GAACAAGGAT CTCGGCCTGC TCGCTCCCGA GAAGGCGGAC GCGATCATCG CCGCGGCCGC CGAGATCGCC GACGGGCGTC ACGACGACCA GTTCCCGATC GACGTGTTCC AGACCGGTTC GGGCACCAGT TCGAACATGA ACTCCAACGA GGTCATCGCC TCGATCGCGG CGGCGAACGG CGTGACCGTC CACCCCAACG ACGACGTGAA CATGTCGCAG AGCTCCAACG ACACGTTCCC GACGGCCACC CACATCGCGG CGACGGAAGC CGCTGTGCGC CACCTGATCC CGGCGCTCGA GGTGCTGCAC GAATCGCTGG CCGGCAAGGC GCGGCAGTGG CGCACGGTCG TGAAGTCCGG GCGCACGCAC CTGATGGACG CGGTGCCGGT GACGCTGGGC CAGGAGTTCG GCGGTTACGC CCGTCAGATC GAGGCCGGTA TCGAGAGGGT CAAGGCGACG CTGCCCCGGC TGGGTGAGCT GGCCATCGGC GGTACCGCCG TCGGCACCGG GCTCAACGCG CCCGACGGCT TCGGCGCCAA GGTCGTCGAG GTGCTCGTCG ACCAGACCGG TCTGGGCGAA TTGACCACGG CCAAGGACTC TTTCGAGGCG CAGGCCGCCC GCGACGGGCT GGTCGAGGCG TCCGGTGCGC TGCGGGTGAT CGCGGTGTCG CTGACCAAGA TCGCCAACGA CATCCGTTGG ATGGGTTCGG GCCCGCTGAC CGGCCTGGCC GAGATCCAGC TGCCGGATCT GCAGCCGGGC AGCTCGATCA TGCCGGGCAA GGTGAATCCC GTTCTGCCCG AAGCCGTCAC GCAGGTCGCC GCCCAGGTCG TCGGCAACGA CGCCGCCGTC GCATGGGGTG GCGCGGCCGG CGCGTTCGAG CTCAACGTGT ACATCCCGAT GATGGCGCGC AACCTGCTCG AGTCGTTCAA GCTGCTGACC AACGTGTCGC GGCTGTTCGC CGAGCGGTGC ATCGACGGCC TGGTCGCCAA CGAGGAGCAC ATGCGCGAGC AGGCCGAGTC GTCGCCGTCG ATCGTGACGC CGCTGAACTC GGCGATCGGC TACGAGGAGG CGGCCAAGGT CGCCAAGGAA GCGCTCAAGG AGAAGAAGAC GATCCGCCAG ACGGTCATCG ACCGCGGGCT GATCGGCGAC AAGCTCTCCG AGGAGGAACT CGACCGTCGC CTCGACGTGC TGGCGATGGC GAAGGTCAAG CAGGGCAAGT AG
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Protein sequence | MTADSAVDQN TEYRIEHDTM GEVRVPKDAL WRAQTQRAVE NFPISGRGLE RTQIRALGLL KGACAQVNKD LGLLAPEKAD AIIAAAAEIA DGRHDDQFPI DVFQTGSGTS SNMNSNEVIA SIAAANGVTV HPNDDVNMSQ SSNDTFPTAT HIAATEAAVR HLIPALEVLH ESLAGKARQW RTVVKSGRTH LMDAVPVTLG QEFGGYARQI EAGIERVKAT LPRLGELAIG GTAVGTGLNA PDGFGAKVVE VLVDQTGLGE LTTAKDSFEA QAARDGLVEA SGALRVIAVS LTKIANDIRW MGSGPLTGLA EIQLPDLQPG SSIMPGKVNP VLPEAVTQVA AQVVGNDAAV AWGGAAGAFE LNVYIPMMAR NLLESFKLLT NVSRLFAERC IDGLVANEEH MREQAESSPS IVTPLNSAIG YEEAAKVAKE ALKEKKTIRQ TVIDRGLIGD KLSEEELDRR LDVLAMAKVK QGK
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