Gene Mmcs_4098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_4098 
Symbol 
ID4112928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp4366640 
End bp4367899 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content68% 
IMG OID638033241 
Productmajor facilitator transporter 
Protein accessionYP_641259 
Protein GI108801062 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCACCG CGGGCGAACC CCGACTCGGA TTGCGCGCCA ACCTCGCTCA GTTCTCGCTG 
CTGGTCGCGG TCAACGCCCT GGTCGGCGGA ATGGTCGGCC AGGAGCAGAC CGTGCTCCCC
CTGCTGGCCG AACAGCAGTT CCATCTCCAG GGCTACACGT TCCTGCTGAC CTACGTTTTC
GCCTTCGGGG TCACGAAGGC GGCCACCAAC TATTTCGCCG GTACCTGGTC GGACCGGTTC
GGGCGGAAAC CGGTACTGCT GGTGGGCTGG CTGCTCGCCA TTCCGGTACC GCTGCTGCTC
ATCTGGGCAC CGTCGTGGAC CTGGGTGATC GTCGCCAACG TCCTGCTGGG CATCAATCAG
GGCATGACGT GGTCGACCAC GGTGATCATG AAGATCGACC TCGTGGGACC CCGACAACGC
GGCCTCGCGA TGGGGTTCAA CGAGGCCGCC GGCTACGTCG CGGTGGCCCT GACGGCGCTG
CTGGCCGGAC ACCTCGCCGC CCGGTTCGGA CTGCGGCCGG CGCCGTTCCT GCTCGGCTTG
TCCTACGCGC TCATCGCCGT CGGACTCACT GCGGTGTTCG TGCGGGAGAC GCGTGGCCAC
GCGGAGCTCG AAGCGACCAC CCACGGCGAC AGCAAGGCCG ATGCCGCACT GACCAACCGG
CAGATCTTCG TCCGCACCAG CTTCACCGAA CCCGCCCTGT CGTCGGCCAG TCAGTCCGGC
CTGGTGAACA ACCTCAACTT CGGCCTGTCG TGGGGACTGT TCCCGATCCT GTTCGCCACC
ACCGGAATGC CCGTGGACCG CATCGGGATC CTAGTGGCCG CATATCCGGC CGTGTGGGGT
ATCGGGCAGT TGGCGACCGG TGCGTTTTCC GACCGGTGGG GCCGCAAGCA CCTGATCACC
GCGGGGATGT TCACCCAGGC CGGTGGGCTG GCGATGATCG CGACCGGCGA CACGTTCCTG
TGGTGGCTTG CCGCGGCGTC GCTGCTGGGC GCGGGCACCG CCATGGTGTA TCCGACGCTG
CTGGCCGCGG TCGGCGACGT CGCCCATCCA CGGTGGCGCG CCCGCGCAGT CGGCATTTAC
CGACTGTGGA GAGACAGCGG ATACGCCGCC GGGGCTGTCG TCGGTGGCGT CACCGCCGAT
CTGTGGGGTC TGCGTGCGGC GGTCTGGGCG GCCGCCGCCA TCACCGTGGC CTCCGGCCTG
ATGGTCGCCG CCCGGATGTA CGAAACCCAC ACGGAGAGAG CGTCGTCGGG CACGGGATGA
 
Protein sequence
MSTAGEPRLG LRANLAQFSL LVAVNALVGG MVGQEQTVLP LLAEQQFHLQ GYTFLLTYVF 
AFGVTKAATN YFAGTWSDRF GRKPVLLVGW LLAIPVPLLL IWAPSWTWVI VANVLLGINQ
GMTWSTTVIM KIDLVGPRQR GLAMGFNEAA GYVAVALTAL LAGHLAARFG LRPAPFLLGL
SYALIAVGLT AVFVRETRGH AELEATTHGD SKADAALTNR QIFVRTSFTE PALSSASQSG
LVNNLNFGLS WGLFPILFAT TGMPVDRIGI LVAAYPAVWG IGQLATGAFS DRWGRKHLIT
AGMFTQAGGL AMIATGDTFL WWLAAASLLG AGTAMVYPTL LAAVGDVAHP RWRARAVGIY
RLWRDSGYAA GAVVGGVTAD LWGLRAAVWA AAAITVASGL MVAARMYETH TERASSGTG