| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_4022 |
|---|
| Symbol | |
|---|
| ID | 4112852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 4285754 |
|---|
| End bp | 4287490 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638033165 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_641183 |
|---|
| Protein GI | 108800986 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCAGACC CGTCTGTCAG AATCGAAGAC ATGTTCGATG GTTCGTTGCC CGGGATCGGC
GACTTCTCCG CGCTCAGTGA CGCGGAGTTG GTGGCCGCCT CGGCCGGCTG GGGACGCGCC
GAAAACGCGG CCACCGCCCG CAAACTGGCC GCCATGGCCG AACTGTTCCG CCGCCGCACC
GGCTGCGACA CCGCCACCGA CCGCCACAAC TGGTTCGTCG ACCCCGACGC CAACGCCGTC
AGCGAACTGG CCGCCGCCCA CAACATCACC GAACGCCTGG CCATGTTCCA AACCCACCGC
GCCGTCGCCC TGGCCGACCG ACTCCCCCAC GTCGCCGCCC TGTTCACCGC CGGACTGATC
ACCGACCTGC TGGTCCGCGC CATCGTGACC CGCACCGCCC TGATCACCGA CCCCACCCTG
ATGGCCGCCG TCGACACCGA CCTGGCCGCC CAGATCACCA GCTGGGGACC CCAATCAGAA
AAGAAAACCC TCGCCGCCAT CGACGCCATC GTCGAAACCC ACGACCCCGG CGCGCTACGG
CGGGTCAAAG ACGCCGAAAA CGACCGCGGC CTGCAATTCG GCTTCATCAG CGACGCCGCC
GGCTTCATGA CCGTCTGGGC CCGCATGTAC GCCCCCGACG GCGCCGCCTT CGAACAACGC
GTCACCGACA TGGCCCACAC CGTCTGCGAC GAGGACCCCC GCACCGCCGA CGAACGCCGC
AACGACGCCC TGGCCGCCGT CGCCACCGGC ACCCACCTAC GCTGCGAATG CCCCAACCCC
GACTGCCCCG GCCACCGCGA CACACAACCC ACCAAAGACG TCGTCGTCCA CATCGTCACC
ACCGAAGAAA CACTCGACGC CGCCCGCACC CAAACCGAAA CGCAGCCCGA ACCGGAGCCC
GAGCCCGAAG AGGAGGCGCA GCCGGAGCCG GAGGCGCAAG CTGAGACTGA GCCCGAGCCC
GAGCCCGAAG ACGAGGCGCA GCCGGAGCCG GAGGCGCAAG CTGAGACTGA GCCCGAGCCC
GAGCCCGAAG ACGAGGCGCA GCCGGAGCCG GAGGCGGAAC CGCAAGCGGA GACTGAGCCA
GCGCCCGAGC CGGAAGCGGA AGCGGCGGCC ACGCTCACCC CGCAGCAGTC AGCCTGCCGC
GCACCGGCAT TCGTCATCGG CGCCGGAGTC ACCAACCCCA CCGTGCTCGC CAACTTCCTC
CACCGCGCCC GCCTCCGCAC CATCCAGCAC CCCGGCAACG CGGCACCCGA ACCCCACTAC
CGACCCTCGG CAGCCCTGCA GGACTTCGTG CGCTGCCGCG ACCTCACCTG CCGCTTCCCC
GGCTGCGACG CCCCGGCCAC CCGCTGCGAC ATCGACCACA CCGCGCCCTG GCCGGCCGGA
CCGACCTGCG CCGCCAACCT CAAATGCCTC TGCCGAAAAC ACCACCTGCT CAAAACCTTC
TGGACCGGTG AAAACGGTTG GTGCGACCAA CAGTTCACCG ACGCCACCAT CGTGTGGACC
TCCCCGAGCG GGCAGACCTA CACCACCCGC CCCGGCAGCG CGCTGCTGTT CCCCACCCTG
TGCACCCCGA CCGCCGACGC GCCGATCCAA CCCACCAAAG ACACCACCAC CGACCGCGGC
CTCAAAATGC CCAAACGCCG CCGCACCCGC GCCCAAAACC GCGCCCGCCG CATCCAAGAA
GAACGCCGAC TCAACGACGA CCTCGTCGCC GAACGCAACA AACCACCCCC GTTCTGA
|
|---|
| Protein sequence | MSDPSVRIED MFDGSLPGIG DFSALSDAEL VAASAGWGRA ENAATARKLA AMAELFRRRT
GCDTATDRHN WFVDPDANAV SELAAAHNIT ERLAMFQTHR AVALADRLPH VAALFTAGLI
TDLLVRAIVT RTALITDPTL MAAVDTDLAA QITSWGPQSE KKTLAAIDAI VETHDPGALR
RVKDAENDRG LQFGFISDAA GFMTVWARMY APDGAAFEQR VTDMAHTVCD EDPRTADERR
NDALAAVATG THLRCECPNP DCPGHRDTQP TKDVVVHIVT TEETLDAART QTETQPEPEP
EPEEEAQPEP EAQAETEPEP EPEDEAQPEP EAQAETEPEP EPEDEAQPEP EAEPQAETEP
APEPEAEAAA TLTPQQSACR APAFVIGAGV TNPTVLANFL HRARLRTIQH PGNAAPEPHY
RPSAALQDFV RCRDLTCRFP GCDAPATRCD IDHTAPWPAG PTCAANLKCL CRKHHLLKTF
WTGENGWCDQ QFTDATIVWT SPSGQTYTTR PGSALLFPTL CTPTADAPIQ PTKDTTTDRG
LKMPKRRRTR AQNRARRIQE ERRLNDDLVA ERNKPPPF
|
|---|
| |