Gene Mmcs_3954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3954 
Symbol 
ID4112784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand+ 
Start bp4214084 
End bp4214515 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content68% 
IMG OID638033097 
Producthistidine triad (HIT) protein 
Protein accessionYP_641115 
Protein GI108800918 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTGTG TGTTCTGCGA CATCGTCGCC GGCGACGCCC CCGCCATCCG CGTCTACGAG 
GATGCGGACT TCCTGGGCAT CCTCGACATC CGCCCGTTCG CCCGCGGCCA CACGCTGGTG 
ATCCCCAAAC GCCACACCGT GAACCTCACC GACACCCCGG CCGACACGGT CGCGGGGATG 
GCCCGCATCG GACAGCGCAT CGCGAAGGCG GCACGTCGCT CGGGGTTGCA CGCCGACGGC 
AACAACGTCG TCATCAACGA CGGGAAGGCG GCCTTTCAGA CCGTGTTCCA CATCCACCTG 
CATGTGCTCC CCCGCCGCAG CGGCGACAAG CTCTCGTTCG CCAAGAACAT GGTGCTGCGG 
CGCGATCCGG ACCGGGAGGA GTCGGGCCGG CTGCTGCGCG AGGCGATCGC CGAACTCGAC 
AACGCGCCGT AG
 
Protein sequence
MSCVFCDIVA GDAPAIRVYE DADFLGILDI RPFARGHTLV IPKRHTVNLT DTPADTVAGM 
ARIGQRIAKA ARRSGLHADG NNVVINDGKA AFQTVFHIHL HVLPRRSGDK LSFAKNMVLR 
RDPDREESGR LLREAIAELD NAP