| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_3526 |
|---|
| Symbol | |
|---|
| ID | 4112358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 3752074 |
|---|
| End bp | 3752910 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638032661 |
|---|
| Product | degV family protein |
|---|
| Protein accession | YP_640689 |
|---|
| Protein GI | 108800492 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTCG TGGTGGTGAC CGACGCGTCC TCCCGGTTGC CGGTCGAGGA TCTGCGGCGC
TGGAACATCC GACAGGTCCC GCTGCACGTG CTGGTCGACG AGCACGATCT GCGCGACGGC
GTGGATGTCA TACCTCACGA CATCCACGAG CGCGCGCACG TGACGACCGC CGGGGCCACG
CCGGGTGAAC TGGGTGCGGC CTACCGGCGG GCGCTGGCCG ACAGCGGCGG TGACGGTGTG
GTCGCAGTAC ATCTCTCGGC GGCCCTGTCG AGCACGTTCA GCTCGGCGGT GACCGCGGCC
CGCGAATTCG GTTCGGCCGT GCGGGTGGTC AACTCGCGAT CGGCCGCGAT GGGGGTGGGC
TTCGTCGCGA CCGCGGCGGC GCGGTGCGCG GCCGCCGGTG GCGACCTCGA CACCGTCGAA
TCGGTCGCTC GGTCGGCGGT GCCGCGGGGG TCGGCGTTCA TCGTGGTGCA CCGGCTCGAC
AACCTGCGGC GCAGCGGGCG GATCGGCGCG ACGTCGTCGT GGTTGGGCAC GGCCCTGTCC
CTGAAACCCC TGCTGCGCAT CGACGTGGAC GGTCGTCTCG AGCTCGCCCA GCGCATCCGC
ACCGCGTCCA AGGCGCACGC CGCACTCGTC GAGCAGGTGG TGGAGTTCGT CGGGGACCGC
CGGGCGGCGG TGGCCGTGCA CCACGTCGAC AACCACGATG CCGCCGACGC GATCGGCGCG
GCGCTGACCG AACGACTGCC GCAGATCGAG ACGCTCACGG TCACCGACAT GGGGCCGGTG
CTGGCGATCC ACCTCGGTGC GGGCGCGGTC GGGGTGTGCG TCAGCCTCTC GGCCTGA
|
|---|
| Protein sequence | MAVVVVTDAS SRLPVEDLRR WNIRQVPLHV LVDEHDLRDG VDVIPHDIHE RAHVTTAGAT
PGELGAAYRR ALADSGGDGV VAVHLSAALS STFSSAVTAA REFGSAVRVV NSRSAAMGVG
FVATAAARCA AAGGDLDTVE SVARSAVPRG SAFIVVHRLD NLRRSGRIGA TSSWLGTALS
LKPLLRIDVD GRLELAQRIR TASKAHAALV EQVVEFVGDR RAAVAVHHVD NHDAADAIGA
ALTERLPQIE TLTVTDMGPV LAIHLGAGAV GVCVSLSA
|
|---|
| |