| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_3438 |
|---|
| Symbol | |
|---|
| ID | 4112270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 3648884 |
|---|
| End bp | 3650632 |
|---|
| Gene Length | 1749 bp |
|---|
| Protein Length | 582 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638032572 |
|---|
| Product | cytochrome-c oxidase |
|---|
| Protein accession | YP_640601 |
|---|
| Protein GI | 108800404 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
|---|
| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.386543 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACAACCG AATCCGTTGT GCAGCCGACG TTGACGGCCA GGCGTCCGTT TCCCGAACGG
CTGGGCCCCA AGGGCAACCT GATCTACAAG GTCATCACGA CCACCGATCA CAAGCTGATC
GGGATCATGT ACTGCGTCGC CTGCTTCGCA TTCTTCCTGG TCGGCGGGTT GATGGCGCTG
TTCATGCGCA CCGAACTCGC GGTCCCCGGG CTGCAGTTCC TGTCGAACGA GCAGTACAAC
CAGCTGTTCA CCATGCACGG CACCGCGATG CTGCTGTTCT ACGCGACGCC CATCGTGTTC
GGGTTCGCGA ACCTGGTGCT GCCGCTGCAG ATCGGCGCCC CGGACGTGGC GTTCCCGCGC
CTCAACGCGC TGTCGTTCTG GCTGTTCGTC TTCGGTGCGC TGATCGCGCT GGCCGGGTTC
ATCACCCCCA GTGGTGCCGC GGACTTCGGC TGGACCGCCT ATACGCCGCT GTCCGATGCG
GTGCACTCAC CCGGGCCGGG TGGTGACCTG TGGATCTTCG GCTTGGGTGT GGGCGGTCTT
GGCACCATCC TCGGCGGCGT CAACATGATC ACCACCGTGG TGTGCATGCG CGCCCCCGGC
ATGACGATGT TCCGGATGCC GATCTTCACC TGGAACATCC TGGTGACCTC GATCCTGGTG
CTGCTGATCT TCCCGCTGCT GACCGCGGCG CTGTTCGCCC TCGCCGCAGA CCGCCACCTC
GGTGCGCACA TCTACGACCC GGCCAACGGC GGTGTGCTGC TGTGGCAGCA CCTGTTCTGG
TTCTTCGGCC ACCCCGAGGT GTATGTCATC GCGCTGCCGT TCTTCGGCAT CGTCAGTGAG
ATCTTCCCGG TGTTCTCCCG CAAGCCGATC TTCGGCTACA CCACCCTGAT CTACGCCACC
ATCGCGATCG CCGCGCTGTC GGTGGCGGTG TGGGCGCACC ACATGTTCGC GACCGGAGCC
GTTCTCCTGC CGTTCTTCTC GTTCATGACG TTCCTCATCG CGGTGCCGAC GGGGATCAAG
TTCTTCAACT GGATCGGCAC GATGTGGCGG GGTCAACTCA CCTTCCAGAC ACCGATGCTG
TTCTCGGTGG GCTTCCTGTT GACGTTCCTG CTCGGTGGTC TGTCGGGGGT GCTGCTGGCC
AGCCCGCCGC TGGACTTCCA CGTCACCGAC AGCTACTTCG TCATCGCGCA CTTCCACTAC
GTGCTGTTCG GCACCATCGT GTTCGCCACC TATGCCGGGA TCTACTTCTG GTTCCCGAAG
ATGACCGGCC GACTGCTCGA CGAGAAGCTG GGCAAGCTGC ACTTCTGGTT GACCTTCATC
GGCTTCCACA CCACGTTCCT GGTGCAGCAC TGGGTCGGTG ACGAGGGTAT GCCGCGCCGC
TACGCCGACT ACCTGCCGTC GGACGGGTTC ACCACGCTCA ACATCGTCTC GACCATCGGG
GCGTTCATCC TGGGCATCTC CACGCTGCCG TTCCTGTGGA ACATCTTCCG CAGCTGGCGC
TACGGCGAGC CCGTCGTGGT CGACGACCCG TGGGGGCACG GCAACTCACT GGAGTGGGCC
ACCAGCTGCC CGCCGCCGCG GCACAACTTC ACCGAACTGC CCCGCATCCG GTCCGAGCGC
CCCGCGTTCG AGCTGCACTA CCCGCACATG GTCGAGCGGA TGCGCGCCGA GGCGCACATC
GGCCGCCACG CGACCGCCGG AGAGATCCAG GAGGGCTACG GGCCACGAAC GGAGCCCGAC
CGCAGCTGA
|
|---|
| Protein sequence | MTTESVVQPT LTARRPFPER LGPKGNLIYK VITTTDHKLI GIMYCVACFA FFLVGGLMAL
FMRTELAVPG LQFLSNEQYN QLFTMHGTAM LLFYATPIVF GFANLVLPLQ IGAPDVAFPR
LNALSFWLFV FGALIALAGF ITPSGAADFG WTAYTPLSDA VHSPGPGGDL WIFGLGVGGL
GTILGGVNMI TTVVCMRAPG MTMFRMPIFT WNILVTSILV LLIFPLLTAA LFALAADRHL
GAHIYDPANG GVLLWQHLFW FFGHPEVYVI ALPFFGIVSE IFPVFSRKPI FGYTTLIYAT
IAIAALSVAV WAHHMFATGA VLLPFFSFMT FLIAVPTGIK FFNWIGTMWR GQLTFQTPML
FSVGFLLTFL LGGLSGVLLA SPPLDFHVTD SYFVIAHFHY VLFGTIVFAT YAGIYFWFPK
MTGRLLDEKL GKLHFWLTFI GFHTTFLVQH WVGDEGMPRR YADYLPSDGF TTLNIVSTIG
AFILGISTLP FLWNIFRSWR YGEPVVVDDP WGHGNSLEWA TSCPPPRHNF TELPRIRSER
PAFELHYPHM VERMRAEAHI GRHATAGEIQ EGYGPRTEPD RS
|
|---|
| |