Gene Mmcs_3107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_3107 
Symbol 
ID4111939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp3288017 
End bp3288811 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content66% 
IMG OID638032237 
ProductABC-2 type transporter 
Protein accessionYP_640270 
Protein GI108800073 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID[TIGR00025] ABC transporter efflux protein, DrrB family
[TIGR01248] daunorubicin resistance protein C 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACTCAA CGTCGGAACA CCGGCATTCG TTGCTCACCG AGAGTTGGAT CTTCGCCAGC 
CGGCTTTTCA TCCAGTGGCG TCGTTACCCG ATGGTGCCAC TGCAGGCACT GCTGTTTCCC
ACCTTGCTGC TGATCATCTA CGGCGCGCTG GTGGGCAAGT CGATGGTCCG CCTCACGGGC
AGCAGCGGGT TGAACGAGCT GATCCCTGTC TGCATGCTCG CCGGTGCCAT GGCGGGCGCC
GTCGGCGCCG GACTCATGGT GCCCTGGGAC CGCGACAGTG GCCTGCTCAC CCGAATGTGG
GTCATGCCGG TGCACCGGAC GGCACCGTTG ACCGGTGCGC TGCTTGCCGA AGCGCTGCGC
ACATTGGTGG CATCGGCAGT CGTCCTCGCA GCCGGGTATC TGATGGGATT CCGGTTCGCG
GGCGGCTGGA CCGGCATGCT CGTCTACCTA CTGATCCCGG TCATCGTGGT GGTCGTGTTC
GCGACGGTGG TGATCACCCT CGCACTACGG CCACAGGGCC GGATCATCCT GACGTGGGCC
CAGACGGTGT GTGTCGGTTT GGCGTTCGGA ACGCTCGCGC CCCCTGAAAG AGTTCCGGCG
CTCGTACGGC CGCTCGCGGA GTTCCAGCCG CTCGCGGCGC CCGCGGCGAC CATGCGCGCG
CTGGCGTCCG GAGGCGACGT GATGCGGCCC ATGCTGCTCA CGGCATTGTG GGTGATTGTC
ATCGCGGCCG TGTTCGTACC GCTCACCGTC CGGGGATATC GGGCGGCGGT CGAGGGCGGG
AAGATCGACA GCTGA
 
Protein sequence
MNSTSEHRHS LLTESWIFAS RLFIQWRRYP MVPLQALLFP TLLLIIYGAL VGKSMVRLTG 
SSGLNELIPV CMLAGAMAGA VGAGLMVPWD RDSGLLTRMW VMPVHRTAPL TGALLAEALR
TLVASAVVLA AGYLMGFRFA GGWTGMLVYL LIPVIVVVVF ATVVITLALR PQGRIILTWA
QTVCVGLAFG TLAPPERVPA LVRPLAEFQP LAAPAATMRA LASGGDVMRP MLLTALWVIV
IAAVFVPLTV RGYRAAVEGG KIDS