Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_2100 |
Symbol | |
ID | 4110933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 2248843 |
End bp | 2251122 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638031221 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_639264 |
Protein GI | 108799067 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR02696] guanosine pentaphosphate synthetase I/polynucleotide phosphorylase [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0644051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGTAG TTGAAATTGA AGACGGTGTG TACGAATCGA CCGCCGTCAT CGACAACGGG AGCTTCGGCA CCCGCACCAT CCGTTTCGAG ACCGGCCGGC TGGCCCAGCA GGCCGCCGGC GCCGTCGTCG CCTACCTCGA CGACGAGACC ATGCTGCTGT CGGCCACCTC GGCCAGCAAG AGCCCGAAGG ACCACTTCGA CTTCTTCCCG CTGACGATCG ACGTCGAAGA GCGGATGTAC GCCGCGGGTC GCATCCCCGG CTCGTTCTTC CGTCGTGAGG GCCGACCCTC CACCGACGCC ATCCTGACCT GCCGGTTGAT CGACCGTCCG CTGCGTCCGA CGTTCGTGTC CGGTCTGCGT AACGAGATCC AGGTCGTCGT CACGGTGATG AGCCTGGATC CCAAGGATCT GTACGACGTG GTGGCCATCA ACGCCGCGTC GGCGTCCACG CAGATCGCCG GGCTGCCGTT CTCGGGTCCG GTCGGCGGCG TGCGCGTCGC GCTGATCGAC GGAACCTGGG TCGCGTTCCC GACCGTCGAG CAGCTCGAGC GCGCGGTGTT CGACATGGTC GTCGCCGGTC GCAAGACCGC TGACGACGTG GCGATCATGA TGGTCGAGGC CGAGGCCACC GACAAGGTCG TCGAACTGGT CGCCGGCGGT GCCCAGGCGC CCACCGAGGC CGTCGTCGCC GAGGGGCTGG AAGCGGCCAA ACCGTTCATC AAGGTGCTCT GTGAGGCCCA GCAGGAGCTG GCCGGGCGCG CCGCCAAGCC GACCGCCGAC TACCCGCTGT TCCCCGAGTA CGGCGAGGAC GTCTACTACG CGGTCGCGTC GGTGGCCACC GACGCGCTGT CGGAGGCGCT GACCATCGCC GGCAAGGAAG AGCGCAACAA CCGCACCGAC GAGATCAAGG TCGAGGTGCT CGGACGGCTC GCCGACCAGT TCGCCGGCCG CGAGAAGGAG ATCGGCGGGG CGTTCCGCTC GCTGACCAAG AAGCTGGTGC GCCAGCGCAT CCTCACCGAC CACTTCCGCA TCGACGGCCG CGGCGTCACC GACATCCGGG CGCTGTCGGC TGAGGTCGCG ATCGTTCCGC GCGCCCACGG CAGCGCGCTG TTCGAGCGCG GTGAGACCCA GATCCTGGGC GTCACCACGC TGGACATGGT CAAGATGGCC CAGCAGATCG ACTCGCTGGG ACCCGAGACC AGCAAGCGCT ACATGCACCA CTACAACTTC CCGCCGTACT CGACCGGTGA GACCGGCCGC GTCGGTTCGC CCAAGCGTCG CGAGATCGGC CACGGTGCGC TGGCCGAGCG GGCCCTCATG CCGGTGCTGC CGAGCGTCGA GGAGTTCCCG TACGCGATCC GCCAGGTGTC GGAGGCGTTG AGCTCCAACG GTTCGACGTC GATGGGGTCG GTGTGTGCGT CGACGCTGTC GCTGCTGAAC GCCGGTGTGC CGCTCAAGGC CCCGGTGGCG GGTATCGCGA TGGGTCTGGT GTCCGACGAT GTCGAGGTGG ACGGCAAGAC CGAGCGTCGC TTCGTGACGC TGACCGACAT CCTCGGTGCC GAGGATGCGT TCGGCGACAT GGACTTCAAG TGCGCGGGCA CCAAGGACTT CGTCACCGCC CTGCAGCTCG ACACCAAGCT CGACGGCATC CCGTCGCAGG TGCTGGCCGG CGCGCTGGCG CAGGCCAAGG ACGCACGCAT CACGATCCTC GAGGTGATGG CCGAGGCCAT CGACGCGCCG GACGAGATGA GCCCCTACGC ACCGCGGATC ACCACGATCA AGGTGCCCGT CGACAAGATC GGCGAGGTCA TCGGGCCCAA GGGCAAGATG ATCAACTCGA TCACCGAGGA GACCGGCGCG TCGATCTCCA TCGAGGACGA CGGCACCGTG TTCGTCGGCG CCTCCAACGG CGAGGCCGCC CAGGCCGCGA TCGACAAGAT CAACGCGATC GCCAACCCGC AGCTGCCGAA GATCGGCGAG CGGTTCCTCG GCACCGTGGT GAAGACGACC GACTTCGGTG CCTTCGTCTC GCTGCTGCCG GGCCGCGACG GTCTGGTGCA CATCTCCAAG CTGGGCCGCG GTAAGCGCAT CGCCAAGGTC GAGGACGTGG CCAAGGTGGG CGACAAGCTG CGCGTCGAGA TCGCCGACAT CGACAACCGC GGCAAGATCT CCCTGGTCCT CGTTGCCGAG GAGGAGGCCG CGGAGGCTTC GGACAACGGT TCGGCCACGC CGTCGGACAA GGCGCCCGCG ACCGCTGATG CGACCACTGC CGGCAATTAG
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Protein sequence | MSVVEIEDGV YESTAVIDNG SFGTRTIRFE TGRLAQQAAG AVVAYLDDET MLLSATSASK SPKDHFDFFP LTIDVEERMY AAGRIPGSFF RREGRPSTDA ILTCRLIDRP LRPTFVSGLR NEIQVVVTVM SLDPKDLYDV VAINAASAST QIAGLPFSGP VGGVRVALID GTWVAFPTVE QLERAVFDMV VAGRKTADDV AIMMVEAEAT DKVVELVAGG AQAPTEAVVA EGLEAAKPFI KVLCEAQQEL AGRAAKPTAD YPLFPEYGED VYYAVASVAT DALSEALTIA GKEERNNRTD EIKVEVLGRL ADQFAGREKE IGGAFRSLTK KLVRQRILTD HFRIDGRGVT DIRALSAEVA IVPRAHGSAL FERGETQILG VTTLDMVKMA QQIDSLGPET SKRYMHHYNF PPYSTGETGR VGSPKRREIG HGALAERALM PVLPSVEEFP YAIRQVSEAL SSNGSTSMGS VCASTLSLLN AGVPLKAPVA GIAMGLVSDD VEVDGKTERR FVTLTDILGA EDAFGDMDFK CAGTKDFVTA LQLDTKLDGI PSQVLAGALA QAKDARITIL EVMAEAIDAP DEMSPYAPRI TTIKVPVDKI GEVIGPKGKM INSITEETGA SISIEDDGTV FVGASNGEAA QAAIDKINAI ANPQLPKIGE RFLGTVVKTT DFGAFVSLLP GRDGLVHISK LGRGKRIAKV EDVAKVGDKL RVEIADIDNR GKISLVLVAE EEAAEASDNG SATPSDKAPA TADATTAGN
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