| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1548 |
|---|
| Symbol | |
|---|
| ID | 4110384 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 1682535 |
|---|
| End bp | 1684112 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 638030669 |
|---|
| Product | putative ABC transporter |
|---|
| Protein accession | YP_638715 |
|---|
| Protein GI | 108798518 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTCG TCCAACGGCT GGCCGCATTG TCGGCGGTGG CGAGTCTGGG CGCCGGACGG
CTGCCCGAGG ACGTCCTCGC CGAGGTCCAC AGCCTCGACG CACGCGCCGG AACCCGGCTG
CGACTCTCGG GCGAGCACAC CGTCGTGGCG TTGGCCGGAG CGACCGGAAG CGGTAAATCC
TCCCTGTTCA ACGCGATCGC GGGCGCGCCG CTGGCGCAGG TCGGCATCCG GCGGCCGACC
ACGTCGGCGA CCCAGGCCGT CGTGTTCGGA CCGTCCCCCG CCGCCGAACT CCTCGACTGG
CTGGAGATCG GCAACCGTCA GGCCGGGGAC GCGTCGGCCA CCCCGCAGCT GTCCGGGCTG
GTGTTGCTCG ACCTGCCCGA CCACGACTCC GTCGAGGTGG CGCACCGCGC CGAGGTCGAC
CGGCTGATCC GGCTGGTCGA CGCCTTCGTC TGGGTGCTCG ACCCGCAGAA GTACGCCGAC
GCCATGCTGC ACGAGGAGTA CCTGCGCCCG CTGGCGCCGC ACCGTGAGGT GATGGTCGTC
GTCCTCAACC AGGCCGACCG GCTCCCCCTG CCCGACCTGG CATCGTGCAT GCACGATCTG
CACCGGCTCA TCGCCGAGGA CGGTCTGGCG GGTGTGCCGG TGCTGGCCAC CTCCGCCGTG
AAGCCGGACG GCGCTTCGGA ATTGCACGAG TTCCTCGTCT CGACCGTGGC CGACCACCGG
GCGCGAACGG CGCGGGTCAG CGCCGATCTC GACGCGATGG CCGCCCGGCT CGACCCGCTG
GCGCCCGCGC GGTCGGAGCC CGCGCTCCGC GACGCCGAGC GGCAGCTGCG TGGCGCCCTC
GCCGGGGCGG CCGCCGTTCC GACGGTGGTC GATGCCGTCG GTCGGGCCTA CACCCGCCGC
GGACTGGCCG CGACCGGGTG GCCGCCGGTC CGCTGGATAC CGAAGATCCG CCCGGATCCG
TTGCGGCGCC TGGGCCTGGA CGCCCCCGAC ACCCAGGGCG AGATCCTGCG GCGGACGTCG
ATGCCCTCGG GCTCGGCCGC GGCGCGCGCC GGAGTCGACA GCGCGGTGCG CACGCTCGCC
GACACCGCAT CCGACGGGCT GCCCGCGCCG TGGCCGCGAA TCATGCGGGA GGCGGCGAGG
TCTCGGGCCG ACGCGGTGCC CGACGCCCTG GACCGGGCGG TCGGCGGGGC CGACCTGGGG
ATGTCGCGGT CACCGCGGTG GTGGCGGTTC TTCGGCGCGC TGCAGTGGCT GCTGATCGCC
GTTGCGGTGG CCGGCGGCGT GTGGTTGGGC GCGCTCGCGG TGTTGGCGTA TCTGCAGATC
GACCTCGACG CGCCGTCGCT CGGCCCGTTC GCGCTGCCGA CGGTCCTGCT CCTCGGCGGG
CTGGCGCTGG GCCTGCTCCT GCGGATCGTC GTGCGCCCGT TCGTGGCGGT GGGCGCGGCG
CGGCGACGGC GGAAAGTGGC CTCCGAGTTG CACCGGCGGG TCGACGGGGT CGCCGACGAA
TTCGTGTTGG CGCCCTTGAG AAACGAGCTC ACCCGCTACG GGCAGCTCTC AGCGGCGGTG
CACGGGCTCA GTCGCTGA
|
|---|
| Protein sequence | MNLVQRLAAL SAVASLGAGR LPEDVLAEVH SLDARAGTRL RLSGEHTVVA LAGATGSGKS
SLFNAIAGAP LAQVGIRRPT TSATQAVVFG PSPAAELLDW LEIGNRQAGD ASATPQLSGL
VLLDLPDHDS VEVAHRAEVD RLIRLVDAFV WVLDPQKYAD AMLHEEYLRP LAPHREVMVV
VLNQADRLPL PDLASCMHDL HRLIAEDGLA GVPVLATSAV KPDGASELHE FLVSTVADHR
ARTARVSADL DAMAARLDPL APARSEPALR DAERQLRGAL AGAAAVPTVV DAVGRAYTRR
GLAATGWPPV RWIPKIRPDP LRRLGLDAPD TQGEILRRTS MPSGSAAARA GVDSAVRTLA
DTASDGLPAP WPRIMREAAR SRADAVPDAL DRAVGGADLG MSRSPRWWRF FGALQWLLIA
VAVAGGVWLG ALAVLAYLQI DLDAPSLGPF ALPTVLLLGG LALGLLLRIV VRPFVAVGAA
RRRRKVASEL HRRVDGVADE FVLAPLRNEL TRYGQLSAAV HGLSR
|
|---|
| |