Gene Mmcs_1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1297 
Symbol 
ID4110134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand- 
Start bp1401955 
End bp1402644 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content65% 
IMG OID638030418 
ProductGtrA-like protein 
Protein accessionYP_638465 
Protein GI108798268 
COG category[S] Function unknown 
COG ID[COG2246] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.597544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTTTCG CCGATGCGAC GATCAAGCGA CTGCCGGGGC CCATCCGGCC GTACGCCGAG 
CAGCACCATG AGCTGATCAA GTTCGCCATC GTCGGCGCGA CCACGTTCGT CATCGACTCG 
GCCATCTTCT TCACGCTCAA GCTGACGATT CTCGAGCCCA AGCCGGTGAC GGCGAAGATC 
ATCGCCGGCA TCGTCGCGGT GATCGCCTCC TACATCCTCA ATCGGGAGTG GAGCTTCCGC 
GACCGCGGTG GACGTGAGCG ACATCACGAG GCGCTGTTGT TCTTCGGGTT CAGCGGTGTC 
GGCGTCCTGC TGAGCATGCT TCCGCTGTAC TTCTCGAGCT ACGTGCTGGG GCTGCGCGTC 
CCCGAGGTGT CGCTGACGAT CGAGAACATC GCCGACTTCG TCTCCGCCTA CATCCTGGGC 
AATCTCCTGC AGATGGCCTT CCGGTTCTGG GCGTTCCGGC GGTGGGTGTT CCCCGAGGAG 
TTCGGCCGCA ACCCGGACAA GGCGCTGGAG TCCACCCTCA CCATCGGTGG TATCGCCGAG 
GCGATGGAGG ATGCCGCCGA GCACCACACC GCCCCGCATG GCGATGCGCC CGTCGAGGGC 
ACGGTCACCC CGTTACGGCG GTCCCGCCGG CGGTCCGGCC TCGATCAGCT CGGTGACTCT 
TCGGACCCCA GGGTGTCGAA GACCTCGTGA
 
Protein sequence
MSFADATIKR LPGPIRPYAE QHHELIKFAI VGATTFVIDS AIFFTLKLTI LEPKPVTAKI 
IAGIVAVIAS YILNREWSFR DRGGRERHHE ALLFFGFSGV GVLLSMLPLY FSSYVLGLRV 
PEVSLTIENI ADFVSAYILG NLLQMAFRFW AFRRWVFPEE FGRNPDKALE STLTIGGIAE 
AMEDAAEHHT APHGDAPVEG TVTPLRRSRR RSGLDQLGDS SDPRVSKTS