| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1052 |
|---|
| Symbol | |
|---|
| ID | 4109891 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 1149147 |
|---|
| End bp | 1150223 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638030175 |
|---|
| Product | integrase catalytic subunit |
|---|
| Protein accession | YP_638222 |
|---|
| Protein GI | 108798025 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACAGGGA AGGCCTCCGG TTGTGAAGTG GAGCTGTCTA GGAACCGCTT CACCAACCAG
GAGGCCTTCG TGTCCCACGC TAACGCTGCA TTGACCCCAC GCGCACGATT GAGGCTTGCG
AGGCTCGTCG TCGAAACGGG CTGGACCTAT GCCGCAGCGG CCAAGATGTT CATGGTTTCA
CCGCGAACTG CCAAGAAATG GGCCGATCGC TTCCGCGCCG AAGGCACGGC TGGGATGGTC
GACCGCAGCT CACGGCCGCA CCACAGTCCC ACCAAGACCA GTCAGCAGGT GATGCGGCGG
ATCGTCGACG TGCGGTGGCG CCAGCGGCTG GGACCGGTGC AGATCGCCGG CCAGCTCACC
ATGCCGGCCT CGACCGTGCA CGCGGTGTTG ACCCGGTGCC GAATCAACCG CCTGTCCTAC
ATCGACCGGG TCACCGGCGA ACCCTTGCGG CGTTATGAGC ACGCTCATCC GGGCTCGTTG
ATCCACGTCG ACGTCACCAA GTTCGCCAAC ATTCCCGACG GCGGCGGACA CAAGTTCCTC
AGTCGAGAAC ACGGCGGACG CAACAGACGA CGGACCGCGC ATCGGACCGG CGATCGCGGT
GATCGCACCA AGAACTGGCG CCCGATAATC GGAACCGCGT TCGTGCACAC AGTGATCGAT
GATCACTCTC GGATGGCCTA TGCCGAGATC TGCACCGACG AGAAGGCCGC TACCGCGGTC
GCCGTGTTGC AGCGGGCGGT GGCGTGGTTC TCCGAACGCG GCGTGACCGT TGAGCGCGTC
CTATCGGACA ACGGGTCGGC CTACCGGTCC TACGCCTGGC GCGATGCCTG CACCCAACTA
CACATCACCC CCAAGCGAAC CCGCCCGTAC AGGCCGCAGA CCAACGGCAA GATCGAACGA
TTCCACCGGA CCCTGGCCGA CGGCTGGGCC TACGCCCACT TCTACGAATC CACCGAACAA
CGCAACACCG CGCTACCGGA CTGGCTGCAC TTCTACAATC ACCACCGAGC CCACTCCGCC
ATCGGAGGTC AGCCACCGGT CACCCGACTG ACCAACCTCC CTGGACATCA CATCTAG
|
|---|
| Protein sequence | MTGKASGCEV ELSRNRFTNQ EAFVSHANAA LTPRARLRLA RLVVETGWTY AAAAKMFMVS
PRTAKKWADR FRAEGTAGMV DRSSRPHHSP TKTSQQVMRR IVDVRWRQRL GPVQIAGQLT
MPASTVHAVL TRCRINRLSY IDRVTGEPLR RYEHAHPGSL IHVDVTKFAN IPDGGGHKFL
SREHGGRNRR RTAHRTGDRG DRTKNWRPII GTAFVHTVID DHSRMAYAEI CTDEKAATAV
AVLQRAVAWF SERGVTVERV LSDNGSAYRS YAWRDACTQL HITPKRTRPY RPQTNGKIER
FHRTLADGWA YAHFYESTEQ RNTALPDWLH FYNHHRAHSA IGGQPPVTRL TNLPGHHI
|
|---|
| |