Gene Mmcs_0901 details

Gene Information

• Locus tag: Mmcs_0901
• ID: 4109742
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Mycobacterium sp. MCS
• Kingdom: Bacteria
• Replicon accession: NC_008146
• Strand: -
• Start bp: 998731
• End bp: 1001979
• Gene Length: 3249 bp
• Protein Length: 1082 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 638030023
• Product: DNA helicase/exodeoxyribonuclease V, gamma subunit
• Protein accession: YP_638073
• Protein GI: 108797876
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1330] Exonuclease V gamma subunit
• TIGRFAM ID: [TIGR01450] exodeoxyribonuclease V, gamma subunit

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCATTCC ATCTGCACCG GGCGGAGCGC ACCGACCTCC TGGCCGACGG ACTCGGTGCC 
CTGCTGTCCA CTCCCCTGGC CGACCCGTTC GCCGAGGAAC TCGTGCTCGT CCCGGCGAAG 
GGCGTCGAGC GGTGGCTGAG CCAGCGGCTC TCGCACGTCC TCGGCCGCGG TTCCGGCGAC 
GACGGGGTCT GCGCGGGCAT CACATTCCGC AATCCGCGGT CCCTCATCGC CGACATTACC 
GGTACCCGGG ACGACGACCC CTGGGCCCCC GACTCGCTGG TCTGGCCGCT GCTCGAGGTC 
ATCGACGACA ACCTCGACCA ACCGTGGTGC ACCACGCTCG CCACCCACCT CGGCCACTTC 
GAACACGGCC AGGAGCAGGA ACTCCGCCAG AGCCGCCGCT ACGCCGTCGC CCGCCGCCTC 
GCCGGCCTGT TCGCCTCCTA CGCCCGCCAG CGCCCCGGAC TGCTCGTCGA CTGGCTCGCC 
GGCAACCCCG CAGACCTCGA CGACGACCTG CACTGGCAGC CGCATCTCTG GCGACACCTC 
GTCGAGCGGG TGCCCGCCGA CCCGCCGCAC ATCCGGCACG CCAAAACCGT TGCCCGCCTG 
CATGAATCAC CCAGCAACCT GCCCGAACGC ATGTCGCTGT TCGGCCACAC CCGGCTGCCC 
TCCACCGAGG TCGAACTGCT CGACGCGCTC GCCACCCACC ACGATCTGCA CCTGTGGCTG 
CCGCACCCCA GCGACGACCT GTGGACCACC CTCGAACCCC ACCGCGGCGC CGTGCGCCGC 
CGCGAGGACA ACACCCACCG CGAGGTCGGC CACCCGCTGC TCGCCACCCT CGGCCGCGAC 
CTGCGCGAAC TGCAGCGCAG CCTGCCCGAC GATTCGCAGA CCGACGAGTA TCTGGGCACC 
GCCGACCATC CCGACACCCT GCTCGGCTGG TTGCAGTCCG ACATCGCCGC CAACGCGGTC 
CGCCCCGACG GCCGCCGACT GCACGACCAC GACCGCTCGG TCCAGGTGCA CAGCTGTCAC 
GGCGCCGCCC GCCAGATCGA CGTCCTGCGC GAGGTGCTGC TCGGCCTGCT CGTCGACGAC 
CCGACGCTCG AACCCCGCGA CATCCTCGTC ATGTGCCCGG ACATCGAGCA CTACGCAGCG 
CTGATCGTCG CCGGCTTCGG CCTCGGCGAC GTGATCCACG GTGCGCACCC AGCGCATCGG 
TTGCGCGTCA AACTCGCCGA CCGCGCACTC ACCCAGACCA ACCCGTTGCT CGGCGTCGCC 
GGTCAACTCC TCGCGCTCGC GGGCGGCCGC GCCACCGCCA CCGAGGTGCT CAACCTCGCC 
GAGGCCCCGT CGATCCGGGC GCGGTTCACC TTCAGCGACG ACGACCTCGA CGCGATCGGT 
GACTGGGTAC GCGAGGCCAA CATCCGGTGG GGTTTCGACC GCGAGCACCG CCACCCCTAC 
GGCGTTGACT TCGTCCAGAA CACCTGGCGT TTCGGACTCG ACCGGGTGCT CGCCGGCGTC 
GCGATGTCCG ACGACTCGCA CGCCTGGCTC GACACCACGC TGCCCCTCGA CGATGTCGGC 
AGCGACCGCG TCGAACTCGC CGGCCGCCTC GCGGAATACG TCGACCGACT GCAGCATTGC 
GTCGAAAACC TCAGCGGCAC AAAGCCACTC CACGAATGGC TCGAAGCGCT GCGCACCGGT 
ATCGACCAGC TGACCGCGGT CCCCGACGAC GACACCTGGC AGACCAGCCA GCTGGAGCGC 
GAGTTCGCCG ACGTCCTCAC CCAGGCCGGC TCCCGCAAGG ACACCCTGCT GCGCCTACCC 
GACGTCAAGG CCCTGCTCGA CCGCCACCTC GCCGGACGGC CCACCCGGGC CAACTTCCGC 
ACCGGCACGC TCACCGTGTG CACGATGGTG CCGATGCGCT CGGTCCCGCA CCGGGTGGTG 
TGCCTGGTGG GTCTCGACGA CGGGGCGTTC CCGCGCCTGG GCGTGGTCGA CGGCGACGAC 
GCACTGGCCC GCGACCCGAT GACCGGTGAA CGCGACATCC GCTCGGAGGA CCGCCAACTG 
CTGCTCGACG CGATCGGCGC GGCGACGGAG AGGCTGGTCG TCACCTACAC CGGCGCCAAC 
GAGTACTCCG GGCAGCGCAA ACCTCCGGCG GTGCCGCTGG TCGAACTGCT CGACGCGCTC 
GACGTCACCA CCGAGGCCCC GGTGCGCAAG CAGATCCTCG TCGAACATCC GTTGCAGCCC 
TTCGACGTTC GCAACGTCAC TCCGGGCGCG CTAGGGGTGC CCGGCACACC GTTCACGTTC 
GACTCGACGG CGCTGACCGC CGCGACCGTC GCGTCCGGGG ACCGCGCCGA GCGGCCGGGT 
CTGCTCACCC ATCCGCTGCC TGCGCCACCG GAGGACGACG TCGCGCTCGA CGATCTGATC 
GGCTTCTTCA AGGATCCGGT CAAGGGGTTC TTCCGGGCGC TGGACTTCAC GCTGCCGTGG 
GACGTCGACG CCGTCCAGGA CGCCATGCCG GTGGAGATCG ACGCGCTGGC CGAATGGCAG 
GTCGGCGAAC GGATGCTCGA CGACATGCTG CGCGGCCTCA ATCCCGAACA GGCGCAACAG 
GCGGAGTGGC GGCGCGGGTC GCTGCCACCC GGCCGGCTCG GCTGGCGCAA GGCGCAGGAG 
TTGCGCGATC AGGCCGCCGC GCTGGCCACC GCGGCGCACC GGCACCGACG GCAACCGGCC 
CGGGCGTATG ACGTCGACAT CCACCTCGGT GGCGGCCGGC GCGTCACCGG CACGGTCCCG 
AAGGTGTACG GCGACCGCAC GGTCACCGTC ACGTACTCCA AACTCGACGG CCGCCACCTG 
CTGGCGTCGT GGATCCAGTT GGCGGCGTTG ACCGCTCAAC TTCCCGGTAC GGACTGGGCG 
GCGGTGTGTA TCGGCCGGCC GAAGCGTGGC GCCACCCCGC GGGAACGGAT GCTCGGCGCG 
CCCGGGGATG CCACCGGTGT GCTGCGCGAT CTGGTGAACA TGTACGACGC GGGGCGCCGT 
GAGCCGATAC CGCTGCCGCC GAAGACGTCC TATGCGTGGG CCGAGGCGCG TCACAGTCGT 
GGAGACGCGG AGCGCGAGTC GCGATACCGC TGGAAGTCGG ACCGCTACCC GGGTGAGGAC 
GCCGAACCGG CCAACGTACG GGTGTGGGGG GCGCACGCCC CGCTGGACAC CCTGCTCGCG 
GCGGGCATGG ACGGCTACGC CGGACGCCTG TGGCTGCCGA TGCTGGAAGC CGAGAGGGAC 
CCCGACTGA 

 

Protein sequence

MPFHLHRAER TDLLADGLGA LLSTPLADPF AEELVLVPAK GVERWLSQRL SHVLGRGSGD 
DGVCAGITFR NPRSLIADIT GTRDDDPWAP DSLVWPLLEV IDDNLDQPWC TTLATHLGHF 
EHGQEQELRQ SRRYAVARRL AGLFASYARQ RPGLLVDWLA GNPADLDDDL HWQPHLWRHL 
VERVPADPPH IRHAKTVARL HESPSNLPER MSLFGHTRLP STEVELLDAL ATHHDLHLWL 
PHPSDDLWTT LEPHRGAVRR REDNTHREVG HPLLATLGRD LRELQRSLPD DSQTDEYLGT 
ADHPDTLLGW LQSDIAANAV RPDGRRLHDH DRSVQVHSCH GAARQIDVLR EVLLGLLVDD 
PTLEPRDILV MCPDIEHYAA LIVAGFGLGD VIHGAHPAHR LRVKLADRAL TQTNPLLGVA 
GQLLALAGGR ATATEVLNLA EAPSIRARFT FSDDDLDAIG DWVREANIRW GFDREHRHPY 
GVDFVQNTWR FGLDRVLAGV AMSDDSHAWL DTTLPLDDVG SDRVELAGRL AEYVDRLQHC 
VENLSGTKPL HEWLEALRTG IDQLTAVPDD DTWQTSQLER EFADVLTQAG SRKDTLLRLP 
DVKALLDRHL AGRPTRANFR TGTLTVCTMV PMRSVPHRVV CLVGLDDGAF PRLGVVDGDD 
ALARDPMTGE RDIRSEDRQL LLDAIGAATE RLVVTYTGAN EYSGQRKPPA VPLVELLDAL 
DVTTEAPVRK QILVEHPLQP FDVRNVTPGA LGVPGTPFTF DSTALTAATV ASGDRAERPG 
LLTHPLPAPP EDDVALDDLI GFFKDPVKGF FRALDFTLPW DVDAVQDAMP VEIDALAEWQ 
VGERMLDDML RGLNPEQAQQ AEWRRGSLPP GRLGWRKAQE LRDQAAALAT AAHRHRRQPA 
RAYDVDIHLG GGRRVTGTVP KVYGDRTVTV TYSKLDGRHL LASWIQLAAL TAQLPGTDWA 
AVCIGRPKRG ATPRERMLGA PGDATGVLRD LVNMYDAGRR EPIPLPPKTS YAWAEARHSR 
GDAERESRYR WKSDRYPGED AEPANVRVWG AHAPLDTLLA AGMDGYAGRL WLPMLEAERD 
PD