| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_0117 |
|---|
| Symbol | |
|---|
| ID | 4108963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | + |
|---|
| Start bp | 131592 |
|---|
| End bp | 132482 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638029242 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_637294 |
|---|
| Protein GI | 108797097 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
|---|
| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.419601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCA CGCAGTCCCA CACCAGCACC GGCACCGTCC TGCGGCAGCG CTTCCCCCGC
GGCTACGCCC GGGCCGAGAA GCTCGTCGCC GCGCCGTCGC GCGGGCTCGA CAGCGTCGGC
CACGTCGCCT GGTTCGTCGT CACCGCCGTC GGCTCCATCG GCCACGCGCT GCGGTACTAC
CGCAAGGAAG TGCTCCGGCT GATCGCCGAG ATCGGCATGG GCACCGGCGC GATGGCCGTC
ATCGGCGGCA CCGTCGCGAT CGTCGGCTTC GTCACCCTCT CGGGCGGCTC GCTCATCGCG
ATCCAGGGTT TCGCCTCCCT GGGCAACATC GGTGTGGAGG CCTTCACCGG ATTCTTCGCC
GCCCTGGTCA ACGTGCGCAT CGCCGCACCG GTGGTGTCCG GTCAGGCGTT GGCCGCGACC
GTGGGCGCCG GTGCGACCGC CGAACTCGGC GCCATGCGCA TCAGCGAGGA GATCGACGCC
CTCGAGGTGA TGGGCATCAA GTCGATCTCC TACCTGGTCT CGACGCGCAT CATGGCCGGC
TTCATCGTGA TCATCCCGCT GTACGCGATG GCGATCATCA TGAGCTTCCT GTCGGCGCAG
GTCACCACGA CGCTGTTCTA CGGACAGTCC ACCGGCACCT ACGAGCACTA CTTCCGAACG
TTCCTGAGAC CGGACGACGT CGCGTGGTCG TTCGTGCAGG CGATCATCAT CTCGATCATC
GTCATGATCA ACCACTGCTA CTACGGCTAC TACGCCAGCG GCGGCCCGGT CGGCGTCGGT
GAGGCCGTCG GTCGCTCGAT GCGGGCCTCC CTCATCGCGA TCGTGCTGGT GGTCCTGTTG
GCTTCGTTGG CGCTCTACGG CACCGACCCG AACTTCAACC TCACGGTGTA G
|
|---|
| Protein sequence | MTTTQSHTST GTVLRQRFPR GYARAEKLVA APSRGLDSVG HVAWFVVTAV GSIGHALRYY
RKEVLRLIAE IGMGTGAMAV IGGTVAIVGF VTLSGGSLIA IQGFASLGNI GVEAFTGFFA
ALVNVRIAAP VVSGQALAAT VGAGATAELG AMRISEEIDA LEVMGIKSIS YLVSTRIMAG
FIVIIPLYAM AIIMSFLSAQ VTTTLFYGQS TGTYEHYFRT FLRPDDVAWS FVQAIIISII
VMINHCYYGY YASGGPVGVG EAVGRSMRAS LIAIVLVVLL ASLALYGTDP NFNLTV
|
|---|
| |