| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_6324 |
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| Symbol | |
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| ID | 4097349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008062 |
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| Strand | - |
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| Start bp | 938101 |
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| End bp | 940593 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638019613 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_626160 |
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| Protein GI | 107029065 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.798758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCCTC GCACCAGTAG ACTGCGCGGC GCCGATTGCG GGCCGTCAAT GTCACGCACC
GCTCATCGCC GGAACGCACT GCTCGCGCTC GGGCTGTACG TCGGCGCGGG CAGCACGCCG
TGCGCCGCGC CGGCCGCCCC CGGACACCCG TCGACGGACG CGCTCGAATT CGACGCTGGC
GCGCTGCGCG AGCACGGTAT CGACGCAACG ACCAGCCGCT ATTTCGCGCA CGCGCCGCGC
TTCATGCCGG GCCTCTCAGC CGTCCGGCTG ACGGTCAACG GCCGGCGCGC CGGTCGTGCC
GATGCGCGAT TCGACACCGA CGGCAACCTG TGCGTCACGC CCGAACTGTT GCGTGCAGCC
GGCCTCGTCG CGCCCGACAC GTTCCGCGAC ACGACCACCT GCCATGACTA CCGGCATGCG
TATCCGCAGG CGATCGTCAC GTTGCGCCCG GCCGACGGCG CGATCGATTT CGTCGTGCCG
GCCGACGCGC TCGACACGCG GCCGCGCACA GCGGATACGT TCGAACGCGG CGGTCTCGCC
GGCCTGATCA ACTACGACGT ACTCGCGATG ACGACACGCA ATCCGGCCGG TACGTCGCAG
TACTGGCAAG CCGCGACCGA GGCCGGATTC AATGCGTCGG ACTGGGTCGT GCGCATCAGC
CAGATCGTCA CGTCGGTGGA CGGCCGCGTG GGTGTCGAGC ATCAGGCGGC CTACGCGCAG
CGCACGTTCG CCGCGCGCAG CACGACGCTG CAGGCCGGGC AGATCGTTCC GCAATCGACG
CTGTTCACGG TGGGCCGGAT GTTCGGCGTG CAGACGTTTC CCGACGAAGC GCTGGCGGCC
GCGCCCGGCA CCGCTGCCCG GGTAACCGGA ATCGCCCGGA CGCAGGCACG CGTGGAGGTA
CGCCAGCTCG GCGTACTGAT CCACGCGTCA CAGGTGCCGC CCGGCCCGTT TTCGCTGGGT
GACCTGCCGC TCGTCAGCGG CACCGCGGAT CTCGACGTGA CAGTGGTCGA GGCAACCGGC
GGCGTTCAGC ACTTCGTCGT GCCGGGCGCG TCGCTGCCCG GCGCCGGGCT CGCGGCGGCG
CAAGGGCTGG CGATCGCCGT CGGCCGCCTG CAGAACGACG GATACGCGCA AGCGCCGTGG
CTCGCGACCG CCACGCGCGG CTGGCAGATC CGTCAGCGTG CGCGGCTGAG CGCCGGCATC
CTGGTGTCGT CGCCGTTGCA GTCGGGCGCC GCGCGCGTCG AATTCGCGCC GCTTGCCGAG
CTCGGTGCGG CCGTCGGCAT CGACGTCAGC CGCACCGCCG CCCGACGCGG CACCCAGGCC
CGCATCGCGT TGGCGAACAC GCTCGACACG GCGCTGCGCG CCAGTCTGTC GTTCGTGCGA
CGCACACCCG GATACCGGGA ACTGACCGAC GCCGTCCGGT CGCTGGACGC CTTCACGGCG
CCCTCGCATA CCCAGTTCGC GACCACACTT GGCTGGCACG ATCGCGTGCT CGGCGCGCTG
TCGTTCGACT ACACGCGCGT CGGGCTGTTC GACGGCTCCG CGCGGCAGCG CGTGTCCGGT
ACGTGGACGC GCCCGTTCGG ACGCGCATCG GTCTCGCTGA ACGTGAACCG CACGCTCGGC
GGCCGCGGCG CGGGCGGCAC CCAGGTCTAC GTGAACATGA GCGTGCCGAT CGGCCGTCGC
CATGTCAGCA CCTATGCGAA CCTCGACGGC AATACGGTGC GCTCCGGCGC ACGCTACGCC
GACACGTTCG GTCGCACCGG CCACTACAGC GTCGCGGCCG ATTACGACAC CGCGAGCCGG
TCGCCGTCGA TCCGCGCGAG CGTCAGCGCG ACGCCGAACC ATGCGCGCGC GACCGTCAAC
GCGGGCGTGT TCGGCGCCGG CCGCTCGATG CTCAGCGTCA ATCTGCGCGG CGCACTCGCG
TGGATCGATG GCGCCGGCAT GCTGTCGCCG TATGCGATTC GCGACACGTT CGCACTCGCG
CGCGTCGGCG AACAGCCGGG TATCGAACTC GCGACGCCGT CCGGCCCGGT CTGGACCGAC
CGGCGCGGCC GGGCCGTCAT CGCGTCGCTG CCCGCATACG CGCAAACCTT CATCCGGATC
AGGACGAAAG ACCTGCCGCG CAATATCGAT CTGAAGAACG GCATGCAGAC CGTCGAAGCG
GGGCGCGGCT CGGTGAGTCG TGTCGAATTC GCCGTCGAGA CGACGCGGCG CGTGTTGCTG
ACCGTGACGC AAGCGAACGG CGCGGCGCTG CCGGTACTGT CGACCGTCAT CGACGACGAC
GACCGGTTCG TGACCGTATC CGCGAGCGAA GGCAAGCTGC TGCTCGCGGG CGCGCAGTTG
AGCATGCCGC TGCGCGTCGT GCTGCCGGAC GGCCGGCACT GCCGGCTGAC GATCGCACTG
CCGGACCGGC CGCCCGTCAC GACGCGCTAC TACGAGCGGG CCGACGCACG GTGCGAGCCG
GTGCCCGACA CCGCCCGCGA CGCCCGCACA TAA
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| Protein sequence | MRPRTSRLRG ADCGPSMSRT AHRRNALLAL GLYVGAGSTP CAAPAAPGHP STDALEFDAG
ALREHGIDAT TSRYFAHAPR FMPGLSAVRL TVNGRRAGRA DARFDTDGNL CVTPELLRAA
GLVAPDTFRD TTTCHDYRHA YPQAIVTLRP ADGAIDFVVP ADALDTRPRT ADTFERGGLA
GLINYDVLAM TTRNPAGTSQ YWQAATEAGF NASDWVVRIS QIVTSVDGRV GVEHQAAYAQ
RTFAARSTTL QAGQIVPQST LFTVGRMFGV QTFPDEALAA APGTAARVTG IARTQARVEV
RQLGVLIHAS QVPPGPFSLG DLPLVSGTAD LDVTVVEATG GVQHFVVPGA SLPGAGLAAA
QGLAIAVGRL QNDGYAQAPW LATATRGWQI RQRARLSAGI LVSSPLQSGA ARVEFAPLAE
LGAAVGIDVS RTAARRGTQA RIALANTLDT ALRASLSFVR RTPGYRELTD AVRSLDAFTA
PSHTQFATTL GWHDRVLGAL SFDYTRVGLF DGSARQRVSG TWTRPFGRAS VSLNVNRTLG
GRGAGGTQVY VNMSVPIGRR HVSTYANLDG NTVRSGARYA DTFGRTGHYS VAADYDTASR
SPSIRASVSA TPNHARATVN AGVFGAGRSM LSVNLRGALA WIDGAGMLSP YAIRDTFALA
RVGEQPGIEL ATPSGPVWTD RRGRAVIASL PAYAQTFIRI RTKDLPRNID LKNGMQTVEA
GRGSVSRVEF AVETTRRVLL TVTQANGAAL PVLSTVIDDD DRFVTVSASE GKLLLAGAQL
SMPLRVVLPD GRHCRLTIAL PDRPPVTTRY YERADARCEP VPDTARDART
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