Gene Bcen_6317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6317 
Symbol 
ID4096960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand- 
Start bp931834 
End bp932430 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content70% 
IMG OID638019606 
Productpolysaccharide deacetylase 
Protein accessionYP_626153 
Protein GI107029058 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTCCA TTCACCTCAG TTTCGACGAC GGCCCCGGCC CCTCGACGCC TGCGCTGCTC 
GACGTGCTGC ACGACGCATC CTGCACGGCG ACCTTCTTCG TGCTCGGCAA GCATCTCGCG 
GGCGCGCTCG ACGTCGCAAC GAGAATCGCG CGCGACGGCC ACCGGCTCGG CAATCACACC 
TATTCGCACG CGAAGCCCGG CGCGCTCGCC AACGCCGCAC TCATCGACGA GATCGACACG 
ACCGACGCGC TGATTCGCGA CGTCTACCGC CGCGCCGGCT TTCCCGCACC GAACGCGATC 
CCGCTGCGCC TTCCATACGG GTTGATGCCG CAGGACGATC GCGCAGCCGT GCTCGCGCGC 
GCACAACGCG AACACACGGG CTGGACCGCG ATCCTGGACG ACTGGCAGCG GCCGGCGCCG 
TCGCCGCAGG CGCTGTTCGA CGCGATGTGC GCGCATGCCG ATGCCTGCGC GGCGCAGCAT 
CGCGACGTGC TGTTCTGCCT GCACGACGGA TCACGGCACG GCGACACGCG GCCCAACACG 
GTCGAAGCGG TGCGGCTGTT CCTGAACCGG CAGCGCGCTG CCGCCATGCC CCGTTAG
 
Protein sequence
MISIHLSFDD GPGPSTPALL DVLHDASCTA TFFVLGKHLA GALDVATRIA RDGHRLGNHT 
YSHAKPGALA NAALIDEIDT TDALIRDVYR RAGFPAPNAI PLRLPYGLMP QDDRAAVLAR 
AQREHTGWTA ILDDWQRPAP SPQALFDAMC AHADACAAQH RDVLFCLHDG SRHGDTRPNT 
VEAVRLFLNR QRAAAMPR