Gene Bcen_6260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_6260 
Symbol 
ID4097400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008062 
Strand+ 
Start bp869537 
End bp870313 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content63% 
IMG OID638019550 
Product3'-5' exonuclease 
Protein accessionYP_626097 
Protein GI107029002 
COG category[L] Replication, recombination and repair 
COG ID[COG3298] Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.329369 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCGA TTCTTGTTTT TGACATCGAG ACGATTCCCG ATGTCGACGG CATTCGCCGT 
CTGGAAGACC TGCCCGCGAC GCTCGACGAT GCCGCGGTGG CCGAACACGC GTTCGCCGCA 
CGCCGCGAGA AGACCGGCGG TGATTTCCTG CCGCACCACC TGCAGCGGAT CGCGGCGATC 
TCGTGCGTGT TTCGCGACAA CAACGGTTTT CGCGTGCGCT CGCTCGGGAC GCCGCAGGAC 
AACGAAGCGA CGCTGATCCA GTCGTTCTAC CGCGTGATCG AGAAATACAC GCCGCAACTC 
GTGTCGTGGA ACGGCGGCGG TTTCGATCTG CCGGTGCTCC ATTACCGCGC GCTCGTGCAC 
GGCATTCCCG CCACCCGCTA CTGGGATCTC GGCGAGGACG ACCGTGAATT CAAGTGGAAC 
AACTACATTT CGCGCTATCA CTCGCGGCAT ACCGACCTGA TGGATGTGCT CGCGATGTAT 
CAGGCGCGGG CGAACGCGCC GCTCGATGCG CTCGCGAAGC TGTGCGGCTT TCCGGGCAAG 
CTCGGAATGG ACGGCAGCCA GGTGTGGCCG GCGTTCCGGG ACGGGCGGAT CGAGGAAATC 
CGCAACTATT GCGAAACCGA CGTCGTCAAC ACCTACCTGC TGTATTGCCG GTTCCAGTTG 
ATGCGCGGCG GCCTGACGCC GAGCGAGTAT GCGGACGAGA TCCTGCTCGT GAAGAACGCG 
CTTGCGCAGG AACCGGCGCC GCACTGGGTC GAATACCTCG CCGGCTTCGA CGCGTAG
 
Protein sequence
MTPILVFDIE TIPDVDGIRR LEDLPATLDD AAVAEHAFAA RREKTGGDFL PHHLQRIAAI 
SCVFRDNNGF RVRSLGTPQD NEATLIQSFY RVIEKYTPQL VSWNGGGFDL PVLHYRALVH 
GIPATRYWDL GEDDREFKWN NYISRYHSRH TDLMDVLAMY QARANAPLDA LAKLCGFPGK 
LGMDGSQVWP AFRDGRIEEI RNYCETDVVN TYLLYCRFQL MRGGLTPSEY ADEILLVKNA 
LAQEPAPHWV EYLAGFDA