| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5574 |
|---|
| Symbol | |
|---|
| ID | 4097179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | - |
|---|
| Start bp | 94262 |
|---|
| End bp | 96097 |
|---|
| Gene Length | 1836 bp |
|---|
| Protein Length | 611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638018850 |
|---|
| Product | periplasmic sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_625416 |
|---|
| Protein GI | 107028321 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3300] MHYT domain (predicted integral membrane sensor domain)
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCGG GACGGGCGCT TGCCCCCGCC GCGGCGATGC ACTCAACCCG TTGCGGGCGC
CCGATCATGC ATGGCATCTA CAACCTTCCG CTCGTCGTGC TGTCGCTCGC GATCGCGACG
CTGGCGTCGT ATACGACGCT CGACCTCGCC GCGTTCATCT CGCTGCTCGA CGATCCGAAG
CTCAAGCGCG CGTGGCTCGG CGGCGGCGCG GCGGCGATGG GCACCGGAAT CTGGTCGATG
CATTTCGTCG GCATGCTCGC GTTTTCGTTG CCGGTGCCGC TCGGCTATGC GTGGCAGGAA
ACGGGCGCGT CGCTGGCGAT CGCGGTGCTC GTATCGTATT TCGCGCTGAA CGTCGTCACG
CGCGCACGGC TGGGCTGGCG GCGGCTGTGC ATGGGCGGTG TGCTGATGGG CGGCGGGATC
GCCGGCATGC ACTACACGGG GATGGCCGCG ATGCACATGC AGCCCGGCAT TCGCTACGAT
GCCGCGCTGT TCGCCGCGTC GATCGGCATC GCGGTGATCG CATCGACGGC CGCGTTGTGG
ATTGCACAGG CGTTGCGCAT GCAGCAGGCG CGCCACGCGA CCGCGCAACG TATCGGCGCG
GCCGTCATCA TGGGCCTCGC GATTACCGGC ATGCACTACA CGGCGATGGC GGCCGCGCAT
TTCGCGCCGG ATGCGCGGTG CGGCGCCGCG AACGGCGTCG ACGCGCCGTG GCTCGCGACC
ACCGTCGCGT TGTTTACGAT GGCGACGCTG GTCGTCACGC TGCTGGTGTG CCGTTTCGAT
GCGCGCACAA CTTTCCTGCG CGGGATGACC GACACGCTCG AACGGCTCGT GCGGGTGCGA
ACCGGCGAAC TCGAACGCGC GCTGTACAGC TACGAGCAAA CGACACGGAT GCTGCAACGC
ACGCGCGAGA ACATGGCGGC CGAGATCGAC GAGCGCAAGG CCGCGCACGC GCTGCTCGAA
CAGGAGAAGG ACGAACAGCG GCGCCTGCTG CATGCGCTCG AGGAAACCCA CGAGCAGTTG
CTGCAGTCGG AAAAACTCGC GTCGATCGGC CAGCTCGCCG CCGGCGTCGC GCACGAGATC
AACAATCCGA TCGGCTTCGT CAGCGCGAAC CTCAATACGT TGAAGACGTG GGTGCGCAGC
CTGCTCGACG TGGTCGCCGC GCATGAAGCC GCGCTGCCGC AGCTCGATCC GGCCACCCGC
GACGCGTTGA CGGCCGTGCA CCGCGCGGTG GATCTCGACT ACGTCCGCGA CGAGATCGCG
ATGCTGATCG ACGAGTCGAT CGACGGCGCG CTGCGCGTGC GGCGCATCGT GCAGGACCTG
CGCGATTTTT CCCGCCCGGC CAGCGACGAA TGGAGCGTGG TCGATCTGCA TGCGGGCCTC
GAGAGCACGC TCAACGTCGT CCACAACGAG CTCAAGTACA AGGCCGACAT CGTGCGCGAT
TACGGCGACG TCCCGCACGT CGAATGCCTG CCGTCGCAAT TGAACCAGGT CTTCATGAAC
CTGCTGGTCA ACGCGGCGCA GGCGATTCCG GAGCGCGGCG TGATCACGAT CCGTACGTCG
AGCGACGGCG ATCAGGTGTC GATCGCGATC AGCGATACCG GCGCCGGCAT GACGCCCGAC
GTCGTCCGGC GGATCTTCGA TCCGTTCTTC ACGACGAAAC CGGTCGGGCA GGGCACGGGG
CTCGGGCTGT CGGTATCGCA CGGCATCGTC GAGCGTCATC GCGGCACCAT CGACGTGACC
AGCGAGCCGG GGCGCGGCAC GACCTTCCGG ATACGGTTGC CGGTTCGGCG TGCCGGCGAC
CGCGCGAGCG CGGCAGCGCT GGAGCAGCGG GCATGA
|
|---|
| Protein sequence | MAAGRALAPA AAMHSTRCGR PIMHGIYNLP LVVLSLAIAT LASYTTLDLA AFISLLDDPK
LKRAWLGGGA AAMGTGIWSM HFVGMLAFSL PVPLGYAWQE TGASLAIAVL VSYFALNVVT
RARLGWRRLC MGGVLMGGGI AGMHYTGMAA MHMQPGIRYD AALFAASIGI AVIASTAALW
IAQALRMQQA RHATAQRIGA AVIMGLAITG MHYTAMAAAH FAPDARCGAA NGVDAPWLAT
TVALFTMATL VVTLLVCRFD ARTTFLRGMT DTLERLVRVR TGELERALYS YEQTTRMLQR
TRENMAAEID ERKAAHALLE QEKDEQRRLL HALEETHEQL LQSEKLASIG QLAAGVAHEI
NNPIGFVSAN LNTLKTWVRS LLDVVAAHEA ALPQLDPATR DALTAVHRAV DLDYVRDEIA
MLIDESIDGA LRVRRIVQDL RDFSRPASDE WSVVDLHAGL ESTLNVVHNE LKYKADIVRD
YGDVPHVECL PSQLNQVFMN LLVNAAQAIP ERGVITIRTS SDGDQVSIAI SDTGAGMTPD
VVRRIFDPFF TTKPVGQGTG LGLSVSHGIV ERHRGTIDVT SEPGRGTTFR IRLPVRRAGD
RASAAALEQR A
|
|---|
| |