| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5558 |
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| Symbol | |
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| ID | 4097341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008062 |
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| Strand | - |
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| Start bp | 77632 |
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| End bp | 81249 |
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| Gene Length | 3618 bp |
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| Protein Length | 1205 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638018836 |
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| Product | allophanate hydrolase subunit 2 |
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| Protein accession | YP_625402 |
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| Protein GI | 107028307 |
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| COG category | [E] Amino acid transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG2049] Allophanate hydrolase subunit 1
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain
[TIGR02712] urea carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.453459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTCG CCAAAGTCCT CGTCGCGAAC CGCGGCGAAA TTGCGTGCCG CGTGATCCGC
ACGCTGAAGC GCCTCGGCAT CGCGTCGGTC GCGATCTATT CGGATGCCGA CCGCGACGCG
CGCCACGTAG CGCTCGCCGA TGAAGCCGTG CGGGTCGGGC CCGCCCCGGC GGCCGACAGC
TATCTGAACG TCGCGGCGAT CCTCGCCGCC GCGCGCGAAA CCGGCGCGCA GGCCGTGCAT
CCCGGCTACG GTTTCCTGTC CGAGCACGCT GGCTTCGCCG ACGCGTGCGA AGCGGCGGGC
CTGCGCTTCA TCGGGCCGCG CGGCGATCAC ATGCGCGCGT TCGGCCTCAA GCACACCGCG
CGCGAACTCG CGGCCGCGCA CGGCGTCGCG CTGCTGCCCG GCACCGGGCT GCTCGACGAC
GTCGCGACGG CGCTCGCCGA AGCCGACGCG ATCGGCTATC CGGTGATGCT GAAAAGCACC
GCGGGCGGCG GCGGCATCGG CATGTCGCTG TGCCGCGATG CGGCGCAGCT CGGCGCAGCG
TTCGAATCCG TCGTGCGGCT CGGCGCCGCG AACTTCGCGC ATGCGGGTGT CTATCTCGAG
AAGTTCGTCG AACACGCGCG GCACATCGAA GTGCAGATCT TCGGCGACGG CCGCGGCGGC
GCGATCGCGC TCGGCGAACG CGATTGCTCG GTGCAGCGGC GTAACCAGAA GGTGATCGAG
GAAACGCCCG CGCCCGACCT GAGCGCCGCC GAGCGCGACG CGCTGCACGC GAGCGCGGTG
CGGCTCGCGC GCGCGGTGGG CTACGCGTCG GCCGGCACGG TCGAATTCGT GTTCGACGCG
AGCACGCGGC AATTCTATTT CCTCGAGGTG AACACGCGGC TGCAGGTCGA GCATTGCGTG
ACCGAGGCCG TGACGGGCGT CGATCTCGTG GAATGGATGA TCCTGCAGGC CGAAGGCGAC
CTGCCGCCGC TCGACACGCT CGCCGTCGTA CCGCGCGGCG CGAGCATCCA GGTGCGGCTC
TATGCGGAGG ACCCGAACAA GCAGTTCCAG CCGAGCGCCG GGCTGCTCAC GCACGTTGCG
TTTCCCGACG ACGTGCGGGT CGACGGCTGG ATCGAGGCAG GCACGGAGAT CAGCGCGCAT
TACGATCCGC TGCTCGCGAA GCTGATCGTG CGCGGCGACA CGCGGCGCGA CGCGCTGGCC
GCGCTGCGGG CCGCGCTCGA CCAGACCGAG CTGTACGGGA TCGAGACCAA CCTCGACTAC
CTGCGTGCCG TCGTCGGCTC CGACACGTTC GCGCGCGGCG CGCCGACCAC TGCCTTCCTG
TCGCGCTTCG CGTTCGCGCC GCACACGATC GACGTGCTCG ACGGCGGCGT GCAGACCACC
GTGCAGCAGG CGCCCGGGCG CGTCGGCTAC TGGAGCGTCG GCGTGCCGCC GTCGGGGCCG
ATGGACGATC GCGCATTCGA TCTCGCGAAC GCGCTGCTCG GCAACGCGCG CGACGCGGCC
GGGCTGGAAT TCACGATGGT CGGCGCGACG CTGCGCTTCA ATACCGCGAC GCTGTTCGTG
CTCGGCGGCG CGCCGCTCGC GGCCACGCTC GACGGTGAAG CGGTGCCGTT CTGGCAGGTC
GTGCGAGCCC GACCGGGCGC AGTATTGAAA CTGGGCGGCG TGACCGGCGC GGGCGTGCGC
GCGTGTCTCG CCGTCAAGGG TGGGCTGCAG GTGCCCGACT ATCTCGGCAG CAAGGCGACC
TTCACGCTCG GCCAGTTCGG CGGCCATGCC GGCCGCGCGC TGCGCAAGGG CGACGTGCTG
CATCTGCACG CGGACGCCGG GCGCGGCGAC GCCGGTGCGA TGCTGGCCGC GGCCGAGATT
CCCGCGCTGA CGCATGCATG GACGCTCGGC GTGCTCGACG GTCCGCATGG CGCACCGGAT
TTCTTCACGC CGGACGACAT CGCGATGCTC TACGGCACAC AGTGGACCGT CCATTACAAC
TCCAGCCGCA CCGGCGTGCG GCTGATCGGC CCGAAGCCGC AATGGGCGCG TGCGGACGGT
GGCGAGGCGG GCCTGCATCC ATCGAACATC CACGACAACG CGTATGCGAT CGGCGCCGTC
GATTTCACCG GCGACATGCC GGTGATTCTC GGCCCGGACG GGCCGAGCCT CGGCGGCTTC
GTGTGCCCGG TGACGGTCGT GCGCGACGAG TTGTGGAAGC TCGGGCAGTT GCGGCCGGGC
GATACCGTGC AGTTCGTGCG CGCGGGCGTG TCGGCCGGGG TATCGACTGC TGCGGTCGTG
GATGCGACGC GTGACGTTGC CGCTGCCGCA TCCGGCGCAT CCGCCTCCTT CGACGATTGC
GTGCTGCATC GCGACCCGTC GGCCGGCGGC GGCATCGGCG TCGTCTACCG GCGCTCGGGC
GACCGCAACG TGCTGGTCGA ATACGGGCCG CTCGTGCTTG ACCTGAACCT GCGCTTTCGC
GTGCACGCCC TGATGGGCTG GCTCGACGCG CACCGGTTGC CCGGCATGCT CGACCTGACG
CCGGGCATCC GCTCGCTCCA GGTGCAGTTC GACGCGCGGA CGCTGCCGCT CGACGCGCTG
CTCGCGCATC TGCAGGCCGC CGAGCGCGAA CTGGCCGACG TGGCGGACCT GCGTGTGCCG
AACCGCATCG TGCATCTGCC GCTGTCGTGG GACGACCCGT CGACGCGCGT CGCGATCGAG
CGCTACATGC AGTCGGTGCG GCCCGATGCG CCGTGGTGCC CGAGCAATAT CGAGTTCATC
CGGCGCATCA ACGGCCTGGC GAGCATCGAC GACGTGAAGC GCATCGTGTT CGACGCGCGC
TATCTGGTGA TGGGCCTCGG CGACGTCTAC CTCGGCGCGC CCGTCGCGAC GCCGCTCGAT
CCGCGGCACC GGCTCGTGAC GACGAAATAC AACCCCGCGC GCACCTGGAC GCCGGAGAAC
GCGGTCGGCA TCGGCGGCGC GTACCTGTGC GTGTACGGGA TGGAAGGGCC GGGCGGCTAT
CAGTTCGTCG GCCGCACCGT GCAGATGTGG AACCGCCACC GCACCACGCG TGAATTCGAG
GCCGGCAAGC CGTGGCTGCT GCGCTTCTTC GACGAGATCC GCTTCTATGA AGTCAGCGAG
GCCGAACTGA CTGCGTTGCG TGCGGATTTC ATCGCGGGTC GCGCGACGCT GAAGATCGAG
GAATCGGTGT TCGATCTGCG CGCCTACAAC CGCTTCCTGC ACGACGAGGC GGAGTCGATC
GCCGCGTTCA AGGCGACGCA GCAGGCCGCG TTCGACGCGG AGCGCGAGCG CTGGCGCGCG
GCGGGCCACG CGGAATACGT CGGCGACGCG GAGCCGGGCG ACGCGCAAGC GGACCGGGTA
GCGGGCGCGC TCGACGACAC GCAGCGGGCG ATTGCCGCCG ACGTGTCGGG CAGCGTATGG
AAGGTGCTGG TGGACGCCGG CGAGCGCGTG ACCGAAGGGC AGGTCGTCGC GATCGTCGAA
TCGATGAAGA TGGAGGTGGC GGTGACGGCA ACGGAAGACG GCACGATCGA GACGATCGAT
TGCGCGCCAG GCGCGGCGGT GGTGGCCGGC CAGCGGCTGA TGGTGATGAA GGCGGGCGCC
GCCGAGGAGG TCGCATGA
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| Protein sequence | MRFAKVLVAN RGEIACRVIR TLKRLGIASV AIYSDADRDA RHVALADEAV RVGPAPAADS
YLNVAAILAA ARETGAQAVH PGYGFLSEHA GFADACEAAG LRFIGPRGDH MRAFGLKHTA
RELAAAHGVA LLPGTGLLDD VATALAEADA IGYPVMLKST AGGGGIGMSL CRDAAQLGAA
FESVVRLGAA NFAHAGVYLE KFVEHARHIE VQIFGDGRGG AIALGERDCS VQRRNQKVIE
ETPAPDLSAA ERDALHASAV RLARAVGYAS AGTVEFVFDA STRQFYFLEV NTRLQVEHCV
TEAVTGVDLV EWMILQAEGD LPPLDTLAVV PRGASIQVRL YAEDPNKQFQ PSAGLLTHVA
FPDDVRVDGW IEAGTEISAH YDPLLAKLIV RGDTRRDALA ALRAALDQTE LYGIETNLDY
LRAVVGSDTF ARGAPTTAFL SRFAFAPHTI DVLDGGVQTT VQQAPGRVGY WSVGVPPSGP
MDDRAFDLAN ALLGNARDAA GLEFTMVGAT LRFNTATLFV LGGAPLAATL DGEAVPFWQV
VRARPGAVLK LGGVTGAGVR ACLAVKGGLQ VPDYLGSKAT FTLGQFGGHA GRALRKGDVL
HLHADAGRGD AGAMLAAAEI PALTHAWTLG VLDGPHGAPD FFTPDDIAML YGTQWTVHYN
SSRTGVRLIG PKPQWARADG GEAGLHPSNI HDNAYAIGAV DFTGDMPVIL GPDGPSLGGF
VCPVTVVRDE LWKLGQLRPG DTVQFVRAGV SAGVSTAAVV DATRDVAAAA SGASASFDDC
VLHRDPSAGG GIGVVYRRSG DRNVLVEYGP LVLDLNLRFR VHALMGWLDA HRLPGMLDLT
PGIRSLQVQF DARTLPLDAL LAHLQAAERE LADVADLRVP NRIVHLPLSW DDPSTRVAIE
RYMQSVRPDA PWCPSNIEFI RRINGLASID DVKRIVFDAR YLVMGLGDVY LGAPVATPLD
PRHRLVTTKY NPARTWTPEN AVGIGGAYLC VYGMEGPGGY QFVGRTVQMW NRHRTTREFE
AGKPWLLRFF DEIRFYEVSE AELTALRADF IAGRATLKIE ESVFDLRAYN RFLHDEAESI
AAFKATQQAA FDAERERWRA AGHAEYVGDA EPGDAQADRV AGALDDTQRA IAADVSGSVW
KVLVDAGERV TEGQVVAIVE SMKMEVAVTA TEDGTIETID CAPGAAVVAG QRLMVMKAGA
AEEVA
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