| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5554 |
|---|
| Symbol | |
|---|
| ID | 4097337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008062 |
|---|
| Strand | - |
|---|
| Start bp | 72814 |
|---|
| End bp | 73551 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638018833 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_625399 |
|---|
| Protein GI | 107028304 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.340153 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTAA CCATTGCGTA CATCGAGGAA CCTCCGTTTG GATGGACCGA AGCGGATGGC
ACCGCGAGAG GTGCCGATCT CGAGCTCGCG GCGACGATCC TCCGGCAGAT AGGCGTCACC
CGCGTCGAGT ATTGCCCGAC GACGTTCAGC GAATTGCTGC CCGGCGTCGC ATCGGGGCAC
TGGGACATGA ACGTGCCGCT CTTCGTGACA CCGCAGCGGG CCCATACCGT TGCGTTCAGC
GTGCCGGTGT GGGGAATCGA GGACGGTTTC CTGGTGCGGC CCGGCAACCC GAAGGCGCTC
AGGCGTTATG CGTCGATCGC CGAACGTCCC GATGCGCGCC TCGGCATCAT CGCCGGACAG
GTACAGCATG ATTCCGCGAT GGCGGCAGGC GTGAGCCGGC GGCAAATCGT CGTCTTCGAA
CAGCAAGCCG ACGCGATCGC GGCCGTGCTC TCCGGCGTGA TCGACGCCTA TGCGAGCACC
GCTTTGGGGA ATCGCATCGT GGCGGGCCGC ATAGGCAGCG CGATGATCGA GGCCGTCGCG
CACGAGCCGG ATGGCGACGG CAGCCAGCGG ACGCCTCCGC TGGGCGCGTT TTCATTCAAC
CGGGAAAACC GGGATCTCCT GACGGCGTTC AATCGGCAAC TGCGCGCGTA TGTCGGCTCG
CCGGACCATC GCGCGCGCAT GGCGAGATTC GGGCTGACCG ATCGCGAGAT CGATCCAGCC
GTCTCGCCGA CAGGATAG
|
|---|
| Protein sequence | MKVTIAYIEE PPFGWTEADG TARGADLELA ATILRQIGVT RVEYCPTTFS ELLPGVASGH
WDMNVPLFVT PQRAHTVAFS VPVWGIEDGF LVRPGNPKAL RRYASIAERP DARLGIIAGQ
VQHDSAMAAG VSRRQIVVFE QQADAIAAVL SGVIDAYAST ALGNRIVAGR IGSAMIEAVA
HEPDGDGSQR TPPLGAFSFN RENRDLLTAF NRQLRAYVGS PDHRARMARF GLTDREIDPA
VSPTG
|
|---|
| |