Gene Bcen_4221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4221 
Symbol 
ID4095922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand- 
Start bp1424167 
End bp1425210 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content68% 
IMG OID638017512 
Productgentisate 1,2-dioxygenase 
Protein accessionYP_624080 
Protein GI107026569 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3435] Gentisate 1,2-dioxygenase 
TIGRFAM ID[TIGR02272] gentisate 1,2-dioxygenase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACCC ATCCGGACGC GACGCGCGCC GCTTACTACG CACGGATCGC CGAGCAGCGC 
CTGGCGCCGC TGTGGGAATC GCTGCACAAC CTCGTGCCGA CCTCGCCGCA GCCGGCGGCG 
CAAGCCGCGA TCTGGAAGTA TGCGCAGATA CGCGACCTCG TGATGCAGGC CGGCAGCGTG 
ATCAGCGCGG AGGAAGCGGT GCGCCGCGTG CTGGTGCTGG AGAACCCCGG GCTGCCGGGC 
AAGTCGAGCA TGACGCCGAA CCTGTATGCA GGATTGCAAT TGATCCTGCC GGGCGAGATC 
GCGCCGAGCC ACCGTCATAC GCAATCGGCG CTGCGCTTCA TCGTCGAGGG GCGCGGCGCG 
TGGACGGCCG TGAACGGCGA GCGCACGACG ATGCATCCGG GCGACTTCAT CATCACGCCG 
TCGTGGGCGT GGCACGACCA CGGCAATCCG TCGGTGGAAG ACGGCGGCGA GCCGGTCGTG 
TGGCTCGACG GGCTCGATAT CCCGTTGCTC GCGAACCTCG ACGCCGGTTT CGCGGAGAAC 
TATCCGGAAG TCGTGCAGCC GGTGAGTCGT CCGGAAGGCG ACAGCTTCGC GCGCTTCGGT 
CACAACATGG TGCCGGTGCG GCATCGCGTG AGCGATCCGA CGTCGCCGGT GTTCAGCTAT 
CCGTATGCGC GCAGCCGCGA GGCGCTCGAC GCGCTGTACC GGAATGGCGA ACTCGATGCG 
TGGGACGGCG TGAAGCTGCG CTACGTGAAC CCCGCGACGG GCGGCTGGCC GATGCCGACC 
ATCGCCACCT TCATGCAGTT CCTGCCCGCC GGCTTCGACG GCCGCCCGTA CCGTAGCACC 
GACGCGACGG TCTATTGCGT CGTCGAGGGC AGCGGCACCG CATCGATCGG CGACCAGGCA 
TTCGCGTTCG CGCCGCACGA CATCTTCGTC GCGCCGTCGT GGGCGCCGGT GCGGTTGTCG 
GCGTCGCGCG ACAGCGTGCT GTTCAGCTAT TCCGACCGGC CGGTGCTGTC CGCGTTGAAC 
CTGCTGCGCG AAGCGCGCGA CTGA
 
Protein sequence
MTTHPDATRA AYYARIAEQR LAPLWESLHN LVPTSPQPAA QAAIWKYAQI RDLVMQAGSV 
ISAEEAVRRV LVLENPGLPG KSSMTPNLYA GLQLILPGEI APSHRHTQSA LRFIVEGRGA 
WTAVNGERTT MHPGDFIITP SWAWHDHGNP SVEDGGEPVV WLDGLDIPLL ANLDAGFAEN 
YPEVVQPVSR PEGDSFARFG HNMVPVRHRV SDPTSPVFSY PYARSREALD ALYRNGELDA 
WDGVKLRYVN PATGGWPMPT IATFMQFLPA GFDGRPYRST DATVYCVVEG SGTASIGDQA 
FAFAPHDIFV APSWAPVRLS ASRDSVLFSY SDRPVLSALN LLREARD