Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3543 |
Symbol | |
ID | 4095318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 666830 |
End bp | 667507 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638016842 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_623410 |
Protein GI | 107025899 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGAAAT TCAATGTTCG CATCGTCTTC GCGTACGACT GGCCGTTGAC GCTGGCCGGT ATCGAGCAGA TCGCAGGCGG CAGCTGCGCG ATCGAGCTCG TCGCGGTCTA CCGGAGCGCG GCCGAACTGG TCGCGTCGCT CGGCGGCGTC GACTGCGACA TCGTGCTGGT CGACTATGCG ATTCGCGGCG ACGAGCAGAT GGACGGCCTC GCGCTGTTCG ACTGGCTGCG CCGCATGCGG CCGAACGTCG GGATCGTCGC GCTGGTCGCC AACGAGAATC CGCTGATCTT CCGCTCGATC CTGGGGATTG GCCACGTGAG CGTCGTCAGC AAGCTCGACG AGGTCGGCCA CATCGTCACG GCGATCCATT CGAGTTACAG CGGCGGCGCC TATCTGTCGC CGTCCGTCCG GCGCGCGGTC GACGCGCTCG GCACGCGCGG CGACCCGCCC GTGAAGCTGT CGGCGCGCGA GATCGAGGTG ATTCGACTGT ATCTGTCGGG CGTGCCGATC AAGACGATCG CACAGCGCCT GAGCAAGGGC AAGCAGACGG TCAGCGCGCA GAAGATCAGC GCGATGAAGA AGCTCGGCGC GAACAACGAC GTCGAGCTGA TTCAGCGCGC GGCGGGGCTG GGGCTCGGGA GCGGGGAGGC CGCGCTGCGG GCGGGCAGCG CGGCGTGA
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Protein sequence | MRKFNVRIVF AYDWPLTLAG IEQIAGGSCA IELVAVYRSA AELVASLGGV DCDIVLVDYA IRGDEQMDGL ALFDWLRRMR PNVGIVALVA NENPLIFRSI LGIGHVSVVS KLDEVGHIVT AIHSSYSGGA YLSPSVRRAV DALGTRGDPP VKLSAREIEV IRLYLSGVPI KTIAQRLSKG KQTVSAQKIS AMKKLGANND VELIQRAAGL GLGSGEAALR AGSAA
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