Gene Bcen_2820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2820 
Symbol 
ID4091707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand- 
Start bp3097305 
End bp3097946 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content65% 
IMG OID638016116 
Productrare lipoprotein A 
Protein accessionYP_622691 
Protein GI107024364 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.285424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCCCG AACCAGAAGG CGACACGTCG ATGAATTTAC GTTTTCCGAG CCGATTCGGA 
ACCATTGCAT TGTTTTTTGC GCTGACGGGC TGTGCGGTGC CATCCAGCCA GACCACCGGC 
AGCGTGAACC AGAAGAAGGC CGTCGACAAG ACGGCCGCCG CAGCGAAGGC GGACGACGAC 
AAGCAGCCGC TCAGTTTCGA TTCCGCGCTG GCATCGATGC CGGCCGCCGA CAGCAAGGAC 
GCGAAGAAGT CGTCGCTGGC GGACGCCGAG CCGATCGACG GCAAGGATGT GTCCGAGTTC 
CGCCAGAGCG GCCGCGCATC GTGGTACGGG CGGGATTTCC ACGGCCGCCG CACCGCGAAC 
GGCGAACGCT TCAACATGAA CGCGTTCACC GCCGCGCACC GCACGCTGCC GCTGTCGTCG 
TGCATCAAGG TGACGAACGC CTCGACCGGC AAGTGGGTCG TCGTGAAGGT CAACGATCGC 
GGGCCGTTCA AGCGTGGCCG CGTACTCGAC CTGTCGTATG CGGCGGCCAA GGTGATCGGC 
CTCGTGCACG CCGGCACGGG CCGCGTGAAG ATCGAAGGAC TGTCGCCGCA GGAAGCGCGC 
GAGGCCCGCG ACGAAATGCT CGCGTCGATC TCGGCGAAAT AA
 
Protein sequence
MRPEPEGDTS MNLRFPSRFG TIALFFALTG CAVPSSQTTG SVNQKKAVDK TAAAAKADDD 
KQPLSFDSAL ASMPAADSKD AKKSSLADAE PIDGKDVSEF RQSGRASWYG RDFHGRRTAN 
GERFNMNAFT AAHRTLPLSS CIKVTNASTG KWVVVKVNDR GPFKRGRVLD LSYAAAKVIG 
LVHAGTGRVK IEGLSPQEAR EARDEMLASI SAK