| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_2520 |
|---|
| Symbol | |
|---|
| ID | 4093030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | - |
|---|
| Start bp | 2768923 |
|---|
| End bp | 2769789 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638015800 |
|---|
| Product | patatin |
|---|
| Protein accession | YP_622392 |
|---|
| Protein GI | 107024065 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.466619 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGACC AGATCGTCTT TGCGGGCGGC GGCAATCGCT GCTGGTGGCA GGCCGGCTTC
TGGGATGTCG CACAGCCGGC CCTCGCCCTG CGCCCGCGCG TGATCACCGG CATCTCGGCC
GGCGCGGCCA CCGCCTGCAT GCTGTATACG CGCGACGCCG CATGGGTGAT GCGCTATTAC
GAAGAGGCGC TGCGCCACAA CCGGAAGAAT GCCTACTGGG GCAACCTGTT CGGGCGCGAG
CCCGTGTTTC CGCATTACCG GATCTATCGT CAGGCGCTGC TCGACATCTA CGGCGAGCCG
TTCGCGCAGC TCGCCGCGGC GCCGGAGATC CGCATCGGCG TGTCGCACGT GCCGCGCTGG
CTCGGTGCGC GCAGCGCGGT CGCGGCCGGC CTCGTCGCAT ACAACATCGA GAAGTACGTG
CGCAAGACGC TGCACCCGAC GCTCGGGCGC ACGCTCGGGT TTCGCCCCGA ATTCGTGCGG
GCGCAGGCCT GCACGCACGT CGACGAACTC GCCGACCTGA TCCTGCAGTC GTCCTGCACG
CCGCCGTTCA CGCCGGTGCT GCGGCGTGGC GGCCGGCCGG TGCTCGACGG CGGGATGGTC
GACAACGTGC CGGTCGATGC GCTCGATCCG TCGCCGGGCG ACGTGCTGGT GCTGGTCACG
CGGCTGTATC CGCGTCCGCA GATGTTCACG GTCGCGCATG GCGACCAGCG GCGGCTGTAC
GTGCAGCCGT CGAGCAAGGT GCCGATTTCG AGCTGGGATT ACACGAGCCC GTCGCAGATG
CGGCATGCGT ACGATCTCGG GCGGCGCGAC GGTGAGCACT TCCTCACGCG GGTCGGCGCG
ATGACGGGCG GCCGCGTGGC CGCCTGA
|
|---|
| Protein sequence | MFDQIVFAGG GNRCWWQAGF WDVAQPALAL RPRVITGISA GAATACMLYT RDAAWVMRYY
EEALRHNRKN AYWGNLFGRE PVFPHYRIYR QALLDIYGEP FAQLAAAPEI RIGVSHVPRW
LGARSAVAAG LVAYNIEKYV RKTLHPTLGR TLGFRPEFVR AQACTHVDEL ADLILQSSCT
PPFTPVLRRG GRPVLDGGMV DNVPVDALDP SPGDVLVLVT RLYPRPQMFT VAHGDQRRLY
VQPSSKVPIS SWDYTSPSQM RHAYDLGRRD GEHFLTRVGA MTGGRVAA
|
|---|
| |