Gene Bcen_1947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_1947 
Symbol 
ID4092480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2148778 
End bp2150340 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content72% 
IMG OID638015228 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_621823 
Protein GI107023496 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTCGC CCATCCGCTC ATCCGAATCG CTCGATGTCG ATGCGCTGCT CGCCGCGCTG 
CCGCGCCGCA TCGCCGACGT GCCCGCGTAC CGGGCCGCGG AGTCGCCCGC GCAGCCAGCA
CTGATCGAGG ATGCGCGCCG GCTGTCGTAC GGCGACCTGG CGCAGGCCGT CGACGCGGCG
GCCGCGCGGC TGGCGAGTCT CGGCGTAGAA GGCGGCGACC GCGTGATGAT CGTCGCCGAA
AACTGCGTCG CGCAGATCGT GCTGCTGTTC GCCGCCGCCC GCCTCGACGC ATGGGCGCTC
GTGTCGAACG CGCGGCTGTC GGCCGCCGAG CTCGACGCGA TCGCCGCGCA TGCGCGCCCG
AAGCTGATCG CGTTCACGAC CGACGTATCG CCCGACGCGC GCGCCCATGC CGAGCGGCTC
GGCGCCACGC CGGCCGCGGC GCTGCCGGTC GACATCGGCG CGTGTTCGTA TCACGTCGAC
GCGAGCGCGC CCGCCGAGCC GGTGGCCACC GGCAGTGCCG CACAATGCGC GGCATTGATC
TACACCACCG GTACGACCGG CACACCGAAA GGCGTGATGC TGTCGCACCG CAACCTGCTG
TTCATCGCGG CGACGTCGAG CATGCTGCGC CGCGTGTCGC CGGACAACGT CGTCTACACG
GTGCTGCCCG TGTCGCACGT GTACGGGCTC GCGTCGGTAT GCCTCGGCAG CCTGTATGCG
GGCGCGACGC TGCGGCTCGC GCCGCGCTTC TCGCCGGAAG CCGTCCGCGT CGCGCTCGCC
GACGAAGGCG TGACGATCTT CCAGGGCGTG CCCGCGATGC ACGCAAAGCT GCTCGAACAC
CTGCACACGC ACGGCCACGC ATGGCGCGCG CCGCGGCTGC GCTTCGCATA TTCGGGCGGC
TCGCCGCTCG ATGCGAACCT GAAGGCGCGC GTCGAGCGCC TGTACGGCGT GCCGCTGCAC
AACGGCTACG GGATGACCGA AAGCAGCCCG ACGATCACGC AGACGCCGCT CGACGCGCCG
CGCACGGACA GTTCGGTCGG CGTGCCGATT CCGGGCGTCG ACGTGCGGAT CGTCGCGCCG
GACGGCAGCG ACGTGCCGCC GGGCGAAGTC GGCGAGATTC GCGTGCGCGG GCCGAACGTG
ATGCTCGGCT ACTACCGCAA CGCGGACGCG ACGCACGCGG CCGTGTCCCC GGACGGCTGG
CTGAGCACCG GCGATCTCGC GCGGCAGGAA GCGGACGGCG CGGTGACGAT CGCGGGCCGC
AGCAAGGAGC TGATCATCCG CTCGGGCTTC AACGTGTATC CGGTCGAGGT CGAACAGGTG
CTGAACGCGC ATCCGGACGT CGTGCAGGCG GCCGTGATCG GCCGCGCGAT CGACGGCAAC
GAGGAAGTGC TCGCGTTCGT CGAACTGGTG CCGGGCGCGG CGGCGGACGA GGCAGCCTTG
CACGCATGGT GCGCGGATCG GCTCACCGCT TACAAACGCC CTGCGCACAT CCGCGTGCTC
GATGCGCTGC CGGCCGCGTC GACCGGCAAG GTGCTGAAGC ACCGGCTGCG CGAGCTGGTC
TGA
 
Protein sequence
MSSPIRSSES LDVDALLAAL PRRIADVPAY RAAESPAQPA LIEDARRLSY GDLAQAVDAA 
AARLASLGVE GGDRVMIVAE NCVAQIVLLF AAARLDAWAL VSNARLSAAE LDAIAAHARP
KLIAFTTDVS PDARAHAERL GATPAAALPV DIGACSYHVD ASAPAEPVAT GSAAQCAALI
YTTGTTGTPK GVMLSHRNLL FIAATSSMLR RVSPDNVVYT VLPVSHVYGL ASVCLGSLYA
GATLRLAPRF SPEAVRVALA DEGVTIFQGV PAMHAKLLEH LHTHGHAWRA PRLRFAYSGG
SPLDANLKAR VERLYGVPLH NGYGMTESSP TITQTPLDAP RTDSSVGVPI PGVDVRIVAP
DGSDVPPGEV GEIRVRGPNV MLGYYRNADA THAAVSPDGW LSTGDLARQE ADGAVTIAGR
SKELIIRSGF NVYPVEVEQV LNAHPDVVQA AVIGRAIDGN EEVLAFVELV PGAAADEAAL
HAWCADRLTA YKRPAHIRVL DALPAASTGK VLKHRLRELV