Gene Bcen_0945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_0945 
Symbol 
ID4093766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp1030490 
End bp1031401 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content68% 
IMG OID638014216 
Productxylose isomerase-like TIM barrel 
Protein accessionYP_620827 
Protein GI107022500 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1082] Sugar phosphate isomerases/epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.879537 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCG CGCTGGACCC TTACATGATT CGCCACCTGC CGCTCGACCG GCTGCCGCAC 
GCGGTGGCCG AGCTCGGCTA CGACCAGATC GAGCTGTCGC CGCGCAGCGA CTTTCTCGAC
TGGTGGGTGA TGCCGCGCGC GACCCGCGAG CGCATGGCCG CATTCCGCCA GGCGATGCGC
GCGAGCGGCG TGGGCCTCGC GTCGCTGCAG CCGATGTACC GCTGGGCGAG CCCGTTCGAC
GACGAGCGGC AATGGGCGGT GCGCTGCTGG AAGAAGGCGA TCGAGGTGGC AGTCGAGATG
GAGTGCCCGC TGATGGTGTC GGAGTTCGGG CGCGGCGCGT CGCCCGAGCG CTCGGTCGGC
GAGCGGCCGG GCGCGAACCC GAAGGAGCAG TGCGAGGCCG CGTGGTTCCG CTCGATGGAC
GAACTGCTGC CGATCCTCGA GCGCGAACGT ATCGTGCTGT CGGTCGAGCC GCATCCGGAG
GACTGGATCG AGCAGTTGCA GCCGGCGATC GACATCGTGA CGAATCTCGG TTCGCCGTCG
TTGAAGCTGT CGTATATCGC GCCGCACACG TTCTACTACG GCGACGACAT GGCCGCGATG
ATCGCGCAGG CCGCGCCGAT CCTCGCGCAC GTGCGCGTGG CCGACACGTT CGACCACCGC
AAGAGCAGCC AGCTGCGCTA CATCGTGAAC CCGCCCGGCT CGAACCAGAT CCGCGTGCAC
CAGCATCTCG ACATCGGGCA GGGCGAGATC GACTGGGACG TGTTTTTCCG CGCACTCGGC
GCCGCTGGCT TCGATGGCGT GATGTCGTCG TGCGTGTTCG CGTGGGAGGA CCGCGCGGAA
GCGTCGTCGC GCTACATGCG CGACGCGATC CAGCGCTACG TCGATCGCCA TTTCGATCGC
ACCGCGCGCT GA
 
Protein sequence
MKIALDPYMI RHLPLDRLPH AVAELGYDQI ELSPRSDFLD WWVMPRATRE RMAAFRQAMR 
ASGVGLASLQ PMYRWASPFD DERQWAVRCW KKAIEVAVEM ECPLMVSEFG RGASPERSVG
ERPGANPKEQ CEAAWFRSMD ELLPILERER IVLSVEPHPE DWIEQLQPAI DIVTNLGSPS
LKLSYIAPHT FYYGDDMAAM IAQAAPILAH VRVADTFDHR KSSQLRYIVN PPGSNQIRVH
QHLDIGQGEI DWDVFFRALG AAGFDGVMSS CVFAWEDRAE ASSRYMRDAI QRYVDRHFDR
TAR